CF504207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2U_MACFA (Ubiquitin-conjugating enzyme E2 U OS=Macaca fascicularis GN=UBE2U PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.121e-12 Identity = 38/118 (32.20%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN-GSICLDIL--KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 417 W+ I G +S + G VF +TIHF +Y + PP V F T FHPN++ + G C+D L ++W+ T+S +LL++ +L++P ++P+ E A + D++ Y + + + + M Sbjct: 36 WEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFVTIPFHPNVDPHTGQPCIDFLDNPKKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILTKDESLYRTILKLFNRPLQM 153
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.121e-12 Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAF-RTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 309 W ++G + YA + + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S + +SI S+L+ Sbjct: 46 WIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLS 125
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBCX_PICPA (Ubiquitin-conjugating enzyme E2-24 kDa OS=Pichia pastoris GN=PEX4 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.465e-12 Identity = 46/151 (30.46%), Postives = 69/151 (45.70%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRT----------------------------------KVFHPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK-SDKAKYESTARSWTQKYAM 417 W A + GP+D+ Y + + I P +YP +PPK F ++ HPNI N G ICLDIL+ +W+PA T+S L +I LL DP P PL ++A++ K +D Y S + +Y++ Sbjct: 46 WTAKLKGPTDTGYQDAFWELQIDIPSNYPTQPPKFTFIVSDDIPRNRRQRQTNQIQDDDEFEGAEKEVLRHCYRMPHPNIAFNTGEICLDILQAKWTPAWTLSSALTAIVLLLNDPEPLSPLDIDMANLMKINDLKAYNSLIEYYVGRYSI 196
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.913e-12 Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 309 W + G + YA + + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+ Sbjct: 46 WVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.913e-12 Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 309 W + G + YA + + + FP YP + P+V F + HP+I SNG ICLDIL + WSPA+T++ V +SI S+L+ Sbjct: 46 WTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLS 125
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC17_CAEEL (Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis elegans GN=ubc-17 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 3.263e-12 Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 85 IMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTK-----VFHPNINSNGSICLDIL-------KEQWSPALTISKVLLSI 294 I GP D+PYA G+F I FP YPF PPK AF T F+PN+ ++G ICL IL +E+W+P ++ +VL+SI Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCSLMQVLVSI 530
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC12_CAEEL (NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.263e-12 Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 1 Query: 94 PSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKY 411 P + Y GG F I PP+Y PP V TKV+HPNIN +GSICL IL++ W P ++ V+ + SL D + +D L + A M+ ++ + R + +Y Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2W_DICDI (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.494e-12 Identity = 37/80 (46.25%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAF-RTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 309 W + G S Y G F + F YP P+V F T HP+I SNG ICL IL + WSPALT+S V LSI S+L+ Sbjct: 35 WVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSPEVIFIGTPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSMLS 114
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.494e-12 Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 309 W + G + YA + + + FP YP + P+V F+ HP+I SNG ICLD+L + WSPA+ +S + LSI S+L+ Sbjct: 46 WIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLS 125
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2W_DANRE (Probable ubiquitin-conjugating enzyme E2 W OS=Danio rerio GN=ube2w PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 2.762e-11 Identity = 35/85 (41.18%), Postives = 48/85 (56.47%), Query Frame = 1 Query: 61 TCSTWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVF--HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 309 T + W + G + Y G F + F YPF+ P+V F + HP++ SNG ICL IL E WSPAL++ V LSI S+L+ Sbjct: 33 TITEWFIDMEGAQGTVYEGEKFQLLFKFSSRYPFESPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117 The following BLAST results are available for this feature:
BLAST of CF504207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 251
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504207 ID=CF504207; Name=CF504207; organism=Citrus sinensis; type=EST; length=472bpback to top |