CF504207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.083e-28 Identity = 58/115 (50.43%), Postives = 75/115 (65.22%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSWT 402 W A I GP D+P+ GG F +T+ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A MY +K +Y E +SWT Sbjct: 36 WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQSWT 150 HSP 2 Score: 21.1718 bits (43), Expect = 2.083e-28 Identity = 8/15 (53.33%), Postives = 9/15 (60.00%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGP 50 K LQ+DPP S P Sbjct: 14 KRLQQDPPAGISGAP 28
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.487e-28 Identity = 57/114 (50.00%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 +Q TI GP SPY G+F + ++ P DYP + PKV F TK++HPNI+ G ICLD+LK WSPAL I VLLSI +LL PNP+DPL ++A + ++ ++ AR WT+ YA Sbjct: 35 FQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYA 148
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 3.530e-28 Identity = 52/112 (46.43%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQK 408 W A I GP D+P+ G F +TI F +YP KPP V F +KVFHPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P A +YK ++ +YE ++ ++ Sbjct: 36 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQ 147 HSP 2 Score: 24.6386 bits (52), Expect = 3.530e-28 Identity = 11/30 (36.67%), Postives = 16/30 (53.33%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K LQ+DPPT S P ++ + +GP Sbjct: 14 KRLQEDPPTGVSGAPTDNNIMIWNAVIFGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.596e-28 Identity = 57/115 (49.57%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR-----SWT 402 W A I GP D+P+ GG F +++ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A MY K +Y R SWT Sbjct: 36 WNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWT 150 HSP 2 Score: 21.9422 bits (45), Expect = 4.596e-28 Identity = 10/30 (33.33%), Postives = 15/30 (50.00%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K LQ+DPP S P ++ + +GP Sbjct: 14 KRLQQDPPAGISGAPQDNNIMLWNAVIFGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 7.236e-28 Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 82 TIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 TI GP +PY GG F + I P YPF+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ L+SI +LL+ P P DP +A Y + + STAR WT+ +A Sbjct: 38 TIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTARYWTETFA 149
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 1.234e-27 Identity = 54/109 (49.54%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 91 GPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 GP +PY GG F+V I P DYPF+PPK+ F TK++HPN++S G+ICLDILK+QWSP T+ L+S+ SLL P P +P ++A +Y + ++ TAR WT YA Sbjct: 42 GPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWTSSYA 150
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.321e-27 Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSWT 402 W A I GP D+P+ GG F +++ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A M+ K +Y E +SWT Sbjct: 36 WNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQSWT 150 HSP 2 Score: 21.9422 bits (45), Expect = 1.321e-27 Identity = 10/30 (33.33%), Postives = 15/30 (50.00%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K LQ+DPP S P ++ + +GP Sbjct: 14 KRLQQDPPAGISGAPQDNNIMLWNAVIFGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.719e-27 Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSWT 402 W A I GP D+P+ GG F +++ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A M+ +K +Y E +SWT Sbjct: 36 WNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSWT 150 HSP 2 Score: 21.1718 bits (43), Expect = 1.719e-27 Identity = 10/30 (33.33%), Postives = 14/30 (46.67%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K LQ DPP S P ++ + +GP Sbjct: 14 KRLQHDPPAGISGAPQDNNIMLWNAVIFGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 8.000e-27 Identity = 54/115 (46.96%), Postives = 77/115 (66.96%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 417 ++ T+ GP S Y GG F + + P +YP PP V F TK++HPN++ G ICL LK+ WSPAL I VLLSI +L+ PNPDDPL ++A ++K ++ + + AR WT+KYA+ Sbjct: 34 FKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYAV 148
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.045e-26 Identity = 59/122 (48.36%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 61 TCSTWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 T ST A I GP D+ YA G+F + I P YPF+PP V+F T ++HPNI+++G ICLDIL K W P+L IS VL S+ LL++PNPDD L+ E++ YK ++ ++ AR T+KYA Sbjct: 43 TFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164 The following BLAST results are available for this feature:
BLAST of CF504207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 251
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504207 ID=CF504207; Name=CF504207; organism=Citrus sinensis; type=EST; length=472bpback to top |