CF504207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.418e-26 Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 70 TWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSW 399 TW A I+GP+D+P+ G F + +HF YP KPP V F +++FHPN+ G +CLDIL+ +WSP ++ +L SI SLL DPN P E +++YK ++ +Y E+ +SW Sbjct: 35 TWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRETVEKSW 149 HSP 2 Score: 26.1794 bits (56), Expect = 1.418e-26 Identity = 12/30 (40.00%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K +Q DPP SA PVA+++ + GP Sbjct: 14 KRMQTDPPAGVSASPVADNVMTWNAVIIGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 1.782e-26 Identity = 56/111 (50.45%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 85 IMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 I GP D+PY GG + + I P YPF PPKV F TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 43 IAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 1.782e-26 Identity = 56/111 (50.45%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 85 IMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 I GP D+PY GG + + I P YPF PPKV F TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 43 IAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 1.782e-26 Identity = 56/111 (50.45%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 85 IMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 I GP D+PY GG + + I P YPF PPKV F TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 43 IAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.846e-26 Identity = 51/115 (44.35%), Postives = 75/115 (65.22%), Query Frame = 1 Query: 70 TWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSW 399 TW A I+GP+D+P+ G F + + F YP KPP+V F +++FHPN+ +NG +CLDIL+ +WSP ++ VL SI SLL DPN P E +++YK ++ +Y E+ RSW Sbjct: 35 TWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISQMFHPNVYANGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRREYIKRVRETVERSW 149 HSP 2 Score: 23.8682 bits (50), Expect = 1.846e-26 Identity = 10/30 (33.33%), Postives = 16/30 (53.33%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K +Q DPP SA P+ +++ + GP Sbjct: 14 KRMQTDPPAGVSASPIPDNVMTWNAVIIGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.403e-26 Identity = 48/117 (41.03%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 70 TWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSWTQ 405 TW A I+GP+D+P+ G F + +HF YP KPP V F +++FHPN+ G +CLDIL+ +WSP ++ +L SI SLL DPN P E +++Y+ ++ +Y E+ +SW + Sbjct: 35 TWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYRDNRKEYIKRVRETVEKSWEE 151 HSP 2 Score: 26.1794 bits (56), Expect = 2.403e-26 Identity = 12/30 (40.00%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K +Q DPP SA PVA+++ + GP Sbjct: 14 KRMQTDPPAGVSASPVADNVMTWNAVIIGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.129e-26 Identity = 50/103 (48.54%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 381 W A I GP +P+ G F +TI F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE Sbjct: 36 WNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 22.3274 bits (46), Expect = 3.129e-26 Identity = 10/30 (33.33%), Postives = 15/30 (50.00%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K LQ+DPP S P ++ + +GP Sbjct: 14 KRLQEDPPAGVSGAPSENNIMVWNAVIFGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.129e-26 Identity = 50/103 (48.54%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 381 W A I GP +P+ G F +TI F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE Sbjct: 36 WNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 22.3274 bits (46), Expect = 3.129e-26 Identity = 10/30 (33.33%), Postives = 15/30 (50.00%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K LQ+DPP S P ++ + +GP Sbjct: 14 KRLQEDPPAGVSGAPSENNIMVWNAVIFGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.129e-26 Identity = 49/116 (42.24%), Postives = 72/116 (62.07%), Query Frame = 1 Query: 70 TWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR-----SWT 402 TW A I+GP+++P+ G F + + F YP KPP V F +++FHPN+ S+G +CLDIL+ +WSP ++ +L S+ SLL DPN P E + +YK + +YE R SWT Sbjct: 35 TWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASMLYKDHRQQYEKRVRDTVEASWT 150 HSP 2 Score: 26.5646 bits (57), Expect = 3.129e-26 Identity = 12/30 (40.00%), Postives = 18/30 (60.00%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K +Q+DPP SA PVA+++ + GP Sbjct: 14 KRMQQDPPQGVSASPVADNVLTWNAVIIGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.072e-26 Identity = 49/103 (47.57%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 381 W A I GP +P+ G F + I F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE Sbjct: 36 WNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 23.483 bits (49), Expect = 4.072e-26 Identity = 10/30 (33.33%), Postives = 15/30 (50.00%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K LQ+DPP S P ++ + +GP Sbjct: 14 KRLQEDPPVGVSGAPSENNIMQWNAVIFGP 43 The following BLAST results are available for this feature:
BLAST of CF504207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 251
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504207 ID=CF504207; Name=CF504207; organism=Citrus sinensis; type=EST; length=472bpback to top |