CF504207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.072e-26 Identity = 49/103 (47.57%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 381 W A I GP +P+ G F + I F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE Sbjct: 36 WNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 23.483 bits (49), Expect = 4.072e-26 Identity = 10/30 (33.33%), Postives = 15/30 (50.00%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K LQ+DPP S P ++ + +GP Sbjct: 14 KRLQEDPPVGVSGAPSENNIMQWNAVIFGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.072e-26 Identity = 49/103 (47.57%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 381 W A I GP +P+ G F + I F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE Sbjct: 36 WNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 23.483 bits (49), Expect = 4.072e-26 Identity = 10/30 (33.33%), Postives = 15/30 (50.00%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K LQ+DPP S P ++ + +GP Sbjct: 14 KRLQEDPPVGVSGAPSENNIMQWNAVIFGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.072e-26 Identity = 49/103 (47.57%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 381 W A I GP +P+ G F + I F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE Sbjct: 36 WNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 23.483 bits (49), Expect = 4.072e-26 Identity = 10/30 (33.33%), Postives = 15/30 (50.00%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K LQ+DPP S P ++ + +GP Sbjct: 14 KRLQEDPPVGVSGAPSENNIMQWNAVIFGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.072e-26 Identity = 49/103 (47.57%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 381 W A I GP +P+ G F + I F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE Sbjct: 36 WNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 23.483 bits (49), Expect = 4.072e-26 Identity = 10/30 (33.33%), Postives = 15/30 (50.00%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K LQ+DPP S P ++ + +GP Sbjct: 14 KRLQEDPPVGVSGAPSENNIMQWNAVIFGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 5.185e-26 Identity = 52/117 (44.44%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 76 QATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 +A I+G +++PY GVF + +H P YPF+PP++ F T ++HPNI+S G ICLD+L K W P+L I+ +L I L+ +PNPDDPL+ +I+ +K +K + AR WT+K+A Sbjct: 35 RAQILGGANTPYEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEKHA 151
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 5.258e-26 Identity = 47/104 (45.19%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 70 TWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 381 TW+A I GP ++P+ G F +++ F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP ++ +L SI SLL +PNP+ P A +Y+ ++ +YE Sbjct: 35 TWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYE 138 HSP 2 Score: 25.0238 bits (53), Expect = 5.258e-26 Identity = 10/30 (33.33%), Postives = 16/30 (53.33%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K LQ+DPP S P +++ + +GP Sbjct: 14 KKLQEDPPAGVSGAPTEDNILTWEAIIFGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 8.982e-26 Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 70 TWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQK 408 TW A I+GP+D+P+ G F + + F YP KPP+V F +++FHPN+ + G +CLDIL+ +WSP ++ VL SI SLL DPN P E +++YK ++ +Y R +K Sbjct: 35 TWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRKEYTKRVRETVEK 147 HSP 2 Score: 24.2534 bits (51), Expect = 8.982e-26 Identity = 11/30 (36.67%), Postives = 16/30 (53.33%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K +Q DPP SA PV +++ + GP Sbjct: 14 KRMQTDPPAGVSASPVPDNVMTWNAVIIGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.155e-25 Identity = 53/117 (45.30%), Postives = 80/117 (68.38%), Query Frame = 1 Query: 76 QATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 +A I+G +++PY GVF + + P YPF+PP++ F T ++HPNI+S G ICLD+L K W P+L I+ VL SI L+++PNPDDPL+ +I+ +K +K + AR WT+K+A Sbjct: 35 RAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHA 151
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 1.169e-25 Identity = 48/113 (42.48%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 70 TWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQK 408 TW A I+GP+D+P+ G F + +HF YP KPP V F +++FHPN+ + G +CLDIL+ +WSP ++ VL SI SLL DPN E +++YK ++ +Y R +K Sbjct: 35 TWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRETVEK 147 HSP 2 Score: 24.2534 bits (51), Expect = 1.169e-25 Identity = 11/30 (36.67%), Postives = 16/30 (53.33%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K +Q DPP SA PV +++ + GP Sbjct: 14 KRMQTDPPAGVSASPVPDNVMTWNAVIIGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.509e-25 Identity = 51/114 (44.74%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSW 399 W A I+GP+D+PY G F + + F DYP KPP V F +++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A ++K K++Y E+ +SW Sbjct: 36 WNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYIKRVKETVEKSW 149 The following BLAST results are available for this feature:
BLAST of CF504207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 251
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504207 ID=CF504207; Name=CF504207; organism=Citrus sinensis; type=EST; length=472bpback to top |