CF504349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504349 vs. ExPASy Swiss-Prot
Match: PUB29_ARATH (U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.739e-21 Identity = 43/58 (74.14%), Postives = 52/58 (89.66%), Query Frame = 3 Query: 90 ELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKE 263 E YI VP+ F+CPISLDVM+SPVSLCTGVTYDR+SIQ WL+ G++TCPATMQ+L TK+ Sbjct: 7 ETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKD 64
BLAST of CF504349 vs. ExPASy Swiss-Prot
Match: PUB27_ARATH (U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.190e-21 Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 3 Query: 78 MVRQELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKE 263 M + +L I VP FRCPISLDVMKSPVSLCTGVTYDR+SIQ WL+ G++TCPATMQIL K+ Sbjct: 1 MRKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKD 62
BLAST of CF504349 vs. ExPASy Swiss-Prot
Match: PUB28_ARATH (U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.201e-18 Identity = 45/63 (71.43%), Postives = 50/63 (79.37%), Query Frame = 3 Query: 78 MVRQELYIA-VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKE 263 M +LYI VP F+CPISLDVMKSPVSL TGVTYDR SIQ WL+ G++TCPATMQIL KE Sbjct: 1 MRSDDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKE 63
BLAST of CF504349 vs. ExPASy Swiss-Prot
Match: PUB17_ARATH (U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.103e-13 Identity = 36/64 (56.25%), Postives = 43/64 (67.19%), Query Frame = 3 Query: 69 RKKMVRQEL---YIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQIL 251 RK V QE+ +I VP F CPISLD+M PV + TG TYDR+SI W+E GH TCP T Q+L Sbjct: 290 RKGFVAQEIGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQML 353
BLAST of CF504349 vs. ExPASy Swiss-Prot
Match: PUB20_ARATH (U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.058e-12 Identity = 28/59 (47.46%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 87 QELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILSTKE 263 +E+ I +P+ F+CPIS ++MK PV + +G+TYDR +I+ W ESG+ TCP T +L++ E Sbjct: 27 EEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLE 85
BLAST of CF504349 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.382e-12 Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 3 Query: 99 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILST 257 I +P+ FRCPISL++MK PV + TG TY+R+ I+ W+ SGH TCP T Q +ST Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMST 323
BLAST of CF504349 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.382e-12 Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 3 Query: 99 IAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILST 257 I +P+ FRCPISL++MK PV + TG TY+R+ I+ W+ SGH TCP T Q +ST Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMST 323
BLAST of CF504349 vs. ExPASy Swiss-Prot
Match: PUB21_ARATH (U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.358e-12 Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 3 Query: 90 ELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQILST 257 E I +P F+CPIS+D+MK PV + TG+TYDR SI+ W+ SG+ TCP T +L+T Sbjct: 26 ESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTT 81
BLAST of CF504349 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.079e-12 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 105 VPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQIL 251 +P FRCPISL++MK PV + TG TY+RSSIQ WL++GH TCP + + L Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETL 296
BLAST of CF504349 vs. ExPASy Swiss-Prot
Match: PUB31_ARATH (U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.252e-12 Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 3 Query: 72 KKMVRQELYIAVPNLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLESGHDTCPATMQIL 251 K+M+ + +P++F CPISL+ M+ PV+LCTG TY+RS+I W GH TCP TMQ L Sbjct: 49 KEMISELELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQEL 108 The following BLAST results are available for this feature:
BLAST of CF504349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504349 ID=CF504349; Name=CF504349; organism=Citrus sinensis; type=EST; length=264bpback to top |