CF504515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 1.560e-24 Identity = 55/120 (45.83%), Postives = 70/120 (58.33%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 FG TG L + +EI AFL +T+ G+ A GP AWG CY E++ Q YCD S Y C G +Y GRG I + WNYNYG G+ LK LL PE +E + ++F+ AIW WM P Sbjct: 131 FGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNYQ--CVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKP 247
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.038e-24 Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPS--QSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 F TTG + +E+ AFLA +T+ G+ A GP +WG C+ E + + YC S ++ PC G +YYGRG I I +NYNYG G+A+ ++LL++P+ + +AT++F+ A W WMTP Sbjct: 121 FATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQW--PCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTP 240
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.011e-23 Identity = 52/124 (41.94%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 12 GFGTTGTKLDKMK-EICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEM--SPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 GF G D K E+ AFLA +T+ G+ A GP AWG C+ E + YC S ++ PC G +YYGRG I + +N+NYG G+A+ ADLL P+ + +AT++F+ A W WMTP Sbjct: 122 GFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQW--PCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTP 243
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.253e-22 Identity = 49/119 (41.18%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMT 371 F TG + +E+ AFLA TS GGP +WG CY + +C + ++ PC PG Y+ RG + I +NYNYGA GEA+ ADLL +PE + + T+AF+ A+W WMT Sbjct: 139 FAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMT 248
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.253e-22 Identity = 49/119 (41.18%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMT 371 F TG + +E+ AFLA TS GGP +WG CY + +C + ++ PC PG Y+ RG + I +NYNYGA GEA+ ADLL +PE + + T+AF+ A+W WMT Sbjct: 139 FAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMT 248
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.499e-19 Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 3 Query: 12 GFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPV 377 GF G+++ +EI AF AH +T CY E++ S +YCD + K +PC G +YYGRG + I WNYNYG G A+ D L P + ++A +AF+AA+W WM V Sbjct: 109 GFAHGGSQVQGKREIAAFFAHATHETG-------------HFCYISEINKSNAYCDPT-KRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSV 216
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.794e-19 Identity = 48/123 (39.02%), Postives = 67/123 (54.47%), Query Frame = 3 Query: 12 GFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPV 377 GF T D +EI AF AHV +T +CY +E++ S YCD + K +PC PG +YYGRG + I WNYNYG G+ + D L P+ + Q+ T++F+ A+W WM V Sbjct: 127 GFARDRTNDDSKREIAAFFAHVTHETG-------------HMCYINEINGASMDYCDKNNKQ-WPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNV 235
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.279e-18 Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 3 Query: 12 GFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPV 377 GF GT+++ +EI AF AHV +T CY E++ S +YCD S + +PC G +YYGRG + I WNYNYG G + + L P + Q+A +AF+ A+W WM V Sbjct: 120 GFAHGGTEVEGKREIAAFFAHVTHETG-------------HFCYISEINKSNAYCDASNRQ-WPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNV 227
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.182e-18 Identity = 45/123 (36.59%), Postives = 63/123 (51.22%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPS--QSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPV 377 FG G+ D +EI AF AH+ +T+ LC+ E +YCD YPC G +YYGRG + + WNYNY G+A+ D L +PE + + +F+AA+W WMT V Sbjct: 126 FGNEGSSDDNKREIAAFFAHISHETT-------------NLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNV 235
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.850e-18 Identity = 47/123 (38.21%), Postives = 67/123 (54.47%), Query Frame = 3 Query: 12 GFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPV 377 GF T D +EI AF AHV +T +CY +E++ + YCD S K +PC PG +YYGRG + I WN+NYG G+ + D L P+ + Q+ T++F+ A+W WM V Sbjct: 124 GFANDRTNDDSKREIAAFFAHVTHETG-------------HMCYINEINGANMDYCDKSNKQ-WPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNV 232 The following BLAST results are available for this feature:
BLAST of CF504515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504515 ID=CF504515; Name=CF504515; organism=Citrus sinensis; type=EST; length=387bpback to top |