CF504515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.485e-30 Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = 3 Query: 12 GFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 GFGTTG + KEI AF +T+ G+ A GP +WG C+ E +PS +YC S ++ PC G YYGRG + + WNYNYG G A+ +DLLN+P+ + + +AF+AAIW WMTP Sbjct: 112 GFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEW--PCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTP 230
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 5.536e-30 Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = 3 Query: 12 GFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMT 371 GFGTTG + KE+ AF +T+ G+ A GP +WG C+ E +P+ YC+ S T+PC G YYGRG + + WNYNYG G A+ DLLN+P+ + +A +AF+AAIW WMT Sbjct: 127 GFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSA--TWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMT 244
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 9.443e-30 Identity = 57/121 (47.11%), Postives = 77/121 (63.64%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 F TTG + + +EI AFLA +T+ G G A GP AWG CYN E++P SYC Y PC PG +Y+GRG + + WNYNYG G A+ DLLN+P+ + + T++F++A W WMTP Sbjct: 94 FATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP 212
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.443e-30 Identity = 57/121 (47.11%), Postives = 77/121 (63.64%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 F TTG + + +EI AFLA +T+ G G A GP AWG CYN E++P SYC Y PC PG +Y+GRG + + WNYNYG G A+ DLLN+P+ + + T++F++A W WMTP Sbjct: 116 FATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP 234
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.747e-29 Identity = 57/121 (47.11%), Postives = 76/121 (62.81%), Query Frame = 3 Query: 12 GFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 GFGTTG K KE+ AFLA +T+ G+ A GP AWG C+ E + + YC +PC PG +YYGRG I + NYNYG G+A+K DL+N+P+ + N T++F+ AIW WMTP Sbjct: 121 GFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPK---DWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTP 238
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 7.994e-29 Identity = 56/120 (46.67%), Postives = 76/120 (63.33%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 F TG + +E+ AFLA + +T+ G+ A GP AWGLCY E++P SYCD + K +PC PG Y+GRG I I WN+NYG G+AL D L +PE + + +AF+ A+W WMTP Sbjct: 91 FAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQ-WPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTP 209
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.044e-28 Identity = 55/120 (45.83%), Postives = 77/120 (64.17%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 FGTTG+ + +E+ AFL +T+ G+ A GP AWG C+ E +PS +YC S +Y PC PG YYGRG + + WNYNYG GEAL+ +LL +P+ + + L+F+ A+W WMTP Sbjct: 44 FGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRY--PCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTP 161
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.181e-28 Identity = 55/119 (46.22%), Postives = 75/119 (63.03%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMT 371 FGTTG + KEI AFLA +T+ G+ A GP +WG CYN E YC S ++ PC PG +Y+GRG I I +NYNYGA G A+ +LLN+P+ + +A ++F+ A+W WMT Sbjct: 47 FGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQW--PCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMT 163
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.969e-27 Identity = 55/121 (45.45%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 12 GFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 GFGTTG + +EI AFLA +T+ G+ A GP AWG CY E +YC S ++ PC G +YYGRG I I +NYNYG G+A+ DL+N+P+ + +A ++F+ A W WMTP Sbjct: 106 GFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQW--PCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTP 224
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.969e-27 Identity = 54/121 (44.63%), Postives = 76/121 (62.81%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 F TTG + +E+ AFLA +T+ G G A GP WG CYN E++P+ YC + YPC PG +Y+GRG + + WNYNYG G A+ DLLN+P+ + + T++F++A W WMTP Sbjct: 114 FATTGDDATRKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPAD-YCQ--WDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTP 231 The following BLAST results are available for this feature:
BLAST of CF504515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504515 ID=CF504515; Name=CF504515; organism=Citrus sinensis; type=EST; length=387bpback to top |