CF504515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 8.291e-18 Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 3 Query: 138 CYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVK 380 CY E++ S+ YCD++ + YPC PG Y+GRG I + WNYNYGA G++L +LL PE + N T+AF +W WM V+ Sbjct: 137 CYIEEINGASRDYCDENNRQ-YPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVR 217
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.291e-18 Identity = 44/119 (36.97%), Postives = 61/119 (51.26%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMT 371 FGTTG + +E+ AF +T+ G+ A GP AWG C +E++PS YYGRG I + YNY G+AL DL+N+P+ + + +AF AIW WMT Sbjct: 68 FGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDP----------------PYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMT 170
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 1.083e-17 Identity = 43/120 (35.83%), Postives = 71/120 (59.17%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQS-YCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMT 371 FGT G + +E+ AFLAH+ TS G P AWGLC+ + + +++ +C S +PC G +Y RG I + N+NYG G+A+ DL+ +P+ +E++ ++F+ A+W WM+ Sbjct: 170 FGTIGDVATRKREVAAFLAHISQATS-GERSDVENPHAWGLCHINTTTVTENDFCTSS---DWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMS 285
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.412e-17 Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPV 377 FG TG+ D +EI AF AH +T CY E+ PS++YCD++ +PC G YYGRG + I WN+NYG G+++ D L P+ + ++ LAF+ A+W W V Sbjct: 109 FGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDET-STQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNV 216
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 3.484e-16 Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 3 Query: 12 GFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSP-SQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWM 368 GFGT T D+ +EI A+ AHV +T LCY E + +YC +S +Y PC P EY+GRG + + WNYNY G+ L D LN P+ + ++ ++F+ ++W W+ Sbjct: 86 GFGTKCTDEDRKREIAAYFAHVTHETG-------------HLCYIEERDGHANNYCQESQQY--PCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI 190
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.258e-15 Identity = 42/123 (34.15%), Postives = 60/123 (48.78%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVK 380 FG G++ D +EI A AH +T CY E+ S+ YCD+ YPC+ Y+GRG I + WN+NYG G A D L PE + + ++F+ A+W WM V+ Sbjct: 109 FGRVGSEDDSKREIAAAFAHFTHETG-------------HFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVR 218
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.570e-15 Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = 3 Query: 12 GFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 GFGTTG + KEI AF +T+ G ++ GP A G C+ E + G YYGRG I + NY G+A++ DL+N+P+ + +AT++F+ AIW WMTP Sbjct: 67 GFGTTGDDTARKKEIAAFFGQTSHETTGGT-LSPDGPYAGGYCFLREGNQM----------------GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTP 170
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.464e-14 Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = 3 Query: 15 FGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 F TTG+ + +E+ AFLA +T+ G+ A GP Y ++Y+GRG I I +NYNYGA G+A+ DLL +P+ + + T+ F+ A+W WMTP Sbjct: 35 FATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGP-------------------------YELGSTSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTP 129
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.261e-14 Identity = 42/120 (35.00%), Postives = 62/120 (51.67%), Query Frame = 3 Query: 12 GFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMT 371 GFGTTG + KEI AF +T+ G ++ GP A G C+ E + G+ +YGRG I + NY G+A+ DL+N+P+ + +AT++F+ AIW WMT Sbjct: 60 GFGTTGDDTARKKEIAAFFGQTSHETTGG-SLSADGPFAGGYCFVREGNQM----------------GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMT 162
BLAST of CF504515 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.049e-12 Identity = 40/121 (33.06%), Postives = 58/121 (47.93%), Query Frame = 3 Query: 12 GFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTP 374 GFGT+G + KEI AF +T+ G + P G C+ + S YYGRG I + NY G A++ DL+N+P+ + +AT++F+ AIW WMTP Sbjct: 68 GFGTSGDDTARRKEIAAFFGQTSHETTGGS--LSAEPFTGGYCFVRQNDQSD-----------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTP 169 The following BLAST results are available for this feature:
BLAST of CF504515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504515 ID=CF504515; Name=CF504515; organism=Citrus sinensis; type=EST; length=387bpback to top |