CF504529
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: GBRL1_XENLA (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Xenopus laevis GN=gabarapl1 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.840e-31 Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 3 Query: 54 RPESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 + E +IR+KYPDR+PVIVEKA ++ +PD+DK+KYLVP+DLTVGQF +++RKRI L E A+F FV N +PPT+A M +YE+N +ED FLY+ YS E+ +G Sbjct: 15 KKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: GBRL1_RAT (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Rattus norvegicus GN=Gabarapl1 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.840e-31 Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 3 Query: 54 RPESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 + E +IR+KYPDR+PVIVEKA ++ +PD+DK+KYLVP+DLTVGQF +++RKRI L E A+F FV N +PPT+A M +YE+N +ED FLY+ YS E+ +G Sbjct: 15 KKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: GBRL1_MOUSE (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Mus musculus GN=Gabarapl1 PE=2 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 1.840e-31 Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 3 Query: 54 RPESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 + E +IR+KYPDR+PVIVEKA ++ +PD+DK+KYLVP+DLTVGQF +++RKRI L E A+F FV N +PPT+A M +YE+N +ED FLY+ YS E+ +G Sbjct: 15 KKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: GBRL1_HUMAN (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Homo sapiens GN=GABARAPL1 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.840e-31 Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 3 Query: 54 RPESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 + E +IR+KYPDR+PVIVEKA ++ +PD+DK+KYLVP+DLTVGQF +++RKRI L E A+F FV N +PPT+A M +YE+N +ED FLY+ YS E+ +G Sbjct: 15 KKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: GBRL1_CAVPO (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Cavia porcellus GN=GABARAPL1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.840e-31 Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 3 Query: 54 RPESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 + E +IR+KYPDR+PVIVEKA ++ +PD+DK+KYLVP+DLTVGQF +++RKRI L E A+F FV N +PPT+A M +YE+N +ED FLY+ YS E+ +G Sbjct: 15 KKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: GBRL1_BOVIN (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Bos taurus GN=GABARAPL1 PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 1.840e-31 Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 3 Query: 54 RPESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 + E +IR+KYPDR+PVIVEKA ++ +PD+DK+KYLVP+DLTVGQF +++RKRI L E A+F FV N +PPT+A M +YE+N +ED FLY+ YS E+ +G Sbjct: 15 KKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: LGG1_CAEEL (Protein lgg-1 OS=Caenorhabditis elegans GN=lgg-1 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.249e-29 Identity = 58/102 (56.86%), Postives = 78/102 (76.47%), Query Frame = 3 Query: 54 RPESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 R E +IR KYPDRIPVIVEKA +S + D+DKKKYLVP+DLTVGQF +++RKRI+L E A+F FV N++P T M +Y+++ +ED FLY+ YS E+ +G Sbjct: 15 RAEGDKIRRKYPDRIPVIVEKAPKSKLHDLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPQTMTTMGQLYQDHHEEDLFLYIAYSDESVYG 116
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: GBRL3_HUMAN (Gamma-aminobutyric acid receptor-associated protein-like 3 OS=Homo sapiens GN=GABARAPL3 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.938e-29 Identity = 55/102 (53.92%), Postives = 79/102 (77.45%), Query Frame = 3 Query: 54 RPESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 + E +IR+KYPDR+P+IVEKA ++ +PD+D++KYLVP+DLT GQF ++RKRI L E A+F FV N +PPT+A M +YE++ +ED FLY+ YS E+ +G Sbjct: 15 KKEGEKIRKKYPDRVPLIVEKAPKARVPDLDRRKYLVPSDLTDGQFYLLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDSHEEDDFLYVAYSNESVYG 116
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: ATG8I_ARATH (Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 6.544e-29 Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 3 Query: 60 ESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 ES I KYP RIPVI EK ++D+P I+KKK+LVP D++VGQF+Y++ R+ LS KA+F+FV N LP TAA+M ++YE KD+DGF+YM YS E TFG Sbjct: 16 ESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: ATG8H_ARATH (Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.458e-28 Identity = 57/100 (57.00%), Postives = 75/100 (75.00%), Query Frame = 3 Query: 60 ESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 ES I KYPDRIPVI+EK +D+PD++K KYLVP D+TVG F++++ KR++L KA+F+FV N LP TA+ M ++Y K+EDGFLYM YS E TFG Sbjct: 20 ESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHMLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119 The following BLAST results are available for this feature:
BLAST of CF504529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504529 ID=CF504529; Name=CF504529; organism=Citrus sinensis; type=EST; length=473bpback to top |