CF504529
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.443e-53 Identity = 96/100 (96.00%), Postives = 98/100 (98.00%), Query Frame = 3 Query: 60 ESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 E+ RIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN LPPTAA+MSAIYEENKDEDGFLYMTYSGENTFG Sbjct: 18 EANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117 HSP 2 Score: 36.1946 bits (82), Expect = 1.443e-53 Identity = 16/17 (94.12%), Postives = 17/17 (100.00%), Query Frame = 2 Query: 8 MAKSSFKLEHPLERRQA 58 MA+SSFKLEHPLERRQA Sbjct: 1 MARSSFKLEHPLERRQA 17
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.443e-53 Identity = 96/100 (96.00%), Postives = 98/100 (98.00%), Query Frame = 3 Query: 60 ESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 E+ RIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN LPPTAA+MSAIYEENKDEDGFLYMTYSGENTFG Sbjct: 18 EANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117 HSP 2 Score: 36.1946 bits (82), Expect = 1.443e-53 Identity = 16/17 (94.12%), Postives = 17/17 (100.00%), Query Frame = 2 Query: 8 MAKSSFKLEHPLERRQA 58 MA+SSFKLEHPLERRQA Sbjct: 1 MARSSFKLEHPLERRQA 17
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.045e-52 Identity = 93/100 (93.00%), Postives = 99/100 (99.00%), Query Frame = 3 Query: 60 ESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 ES+RIREKYPDRIPVIVE+AERSD+P+IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIF+FVKN LPPTAAMMSAIY+ENKDEDGFLYMTYSGENTFG Sbjct: 18 ESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117 HSP 2 Score: 33.8834 bits (76), Expect = 2.045e-52 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 8 MAKSSFKLEHPLERRQ 55 MA SSFKLEHPLERRQ Sbjct: 1 MANSSFKLEHPLERRQ 16
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 3.776e-51 Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 3 Query: 60 ESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 E+ RIREKY DRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKN LPPTAA+MSAIYEENKDEDGFLYMTYSGENTFG Sbjct: 18 EANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117 HSP 2 Score: 33.113 bits (74), Expect = 3.776e-51 Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 2 Query: 8 MAKSSFKLEHPLERRQA 58 MAKSSFKL+H LERRQA Sbjct: 1 MAKSSFKLDHTLERRQA 17
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.776e-51 Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 3 Query: 60 ESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 359 E+ RIREKY DRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKN LPPTAA+MSAIYEENKDEDGFLYMTYSGENTFG Sbjct: 18 EANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117 HSP 2 Score: 33.113 bits (74), Expect = 3.776e-51 Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 2 Query: 8 MAKSSFKLEHPLERRQA 58 MAKSSFKL+H LERRQA Sbjct: 1 MAKSSFKLDHTLERRQA 17
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 6.416e-51 Identity = 89/102 (87.25%), Postives = 99/102 (97.06%), Query Frame = 3 Query: 60 ESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAS 365 ESARIREKY DRIPVIVEKA+++D+P+IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIF+FVKN LPPTA++MSAIYEENKDEDGFLYMTYSGENTFG++ Sbjct: 18 ESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA 119 HSP 2 Score: 35.039 bits (79), Expect = 6.416e-51 Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2 Query: 8 MAKSSFKLEHPLERRQA 58 MA++SFKLEHPLERRQA Sbjct: 1 MARTSFKLEHPLERRQA 17
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 6.416e-51 Identity = 89/102 (87.25%), Postives = 99/102 (97.06%), Query Frame = 3 Query: 60 ESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAS 365 ESARIREKY DRIPVIVEKA+++D+P+IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIF+FVKN LPPTA++MSAIYEENKDEDGFLYMTYSGENTFG++ Sbjct: 18 ESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA 119 HSP 2 Score: 35.039 bits (79), Expect = 6.416e-51 Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2 Query: 8 MAKSSFKLEHPLERRQA 58 MA++SFKLEHPLERRQA Sbjct: 1 MARTSFKLEHPLERRQA 17
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.421e-50 Identity = 92/103 (89.32%), Postives = 100/103 (97.09%), Query Frame = 3 Query: 60 ESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGASF 368 E+ARIREKYPDRIPVIVE+AE+SD+PDID+KKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKNILPPTAA+MSAIYEE+KDEDGFLYM+YSGENTFG F Sbjct: 18 EAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGIFF 120 HSP 2 Score: 30.4166 bits (67), Expect = 1.421e-50 Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 8 MAKSSFKLEHPLERRQA 58 MA SSFK EHPLE+RQA Sbjct: 1 MAISSFKHEHPLEKRQA 17
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 5.805e-49 Identity = 91/101 (90.10%), Postives = 98/101 (97.03%), Query Frame = 3 Query: 60 ESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGA 362 ES+RIREKYPDRIPVIVEKA +SD+PDIDKKKYLVPADLTVGQFVYVVRKRIKL AEKAIF+FVKN LPPTAA+MSAIYEE+KDEDGFLYMTYSGENTFG+ Sbjct: 18 ESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118 HSP 2 Score: 26.5646 bits (57), Expect = 5.805e-49 Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 8 MAKSSFKLEHPLERRQA 58 MAKSSFK+ +PLE R + Sbjct: 1 MAKSSFKISNPLEARMS 17
BLAST of CF504529 vs. ExPASy Swiss-Prot
Match: ATG8B_ARATH (Autophagy-related protein 8b OS=Arabidopsis thaliana GN=ATG8B PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 3.710e-48 Identity = 89/103 (86.41%), Postives = 97/103 (94.17%), Query Frame = 3 Query: 60 ESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGASF 368 ES RIR KYP+R+PVIVEKA +SD+PDIDKKKYLVPADLT+GQFVYVVRKRIKL AEKAIF+FVKN LPPTAA+MSAIYEE+KDEDGFLYMTYSGENTFG SF Sbjct: 18 ESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGSF 120 HSP 2 Score: 25.409 bits (54), Expect = 3.710e-48 Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 8 MAKSSFKLEHPLERRQA 58 M K+SFKL +PLE R A Sbjct: 1 MEKNSFKLSNPLEMRMA 17 The following BLAST results are available for this feature:
BLAST of CF504529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504529 ID=CF504529; Name=CF504529; organism=Citrus sinensis; type=EST; length=473bpback to top |