CF504597
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH2_SOLTU (3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Solanum tuberosum GN=HMG2 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.024e-44 Identity = 84/112 (75.00%), Postives = 99/112 (88.39%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + SVPMATTEGCLVAS NRGCKAI+ SGGAT ++L+DGMTRAP VRFG+AKRAAELK F+E+P+ F+ L+ VFN+SSRF RLQ I+CAIAGKNLY++F CSTGDAMGMNM Sbjct: 267 GKEFSVPMATTEGCLVASTNRGCKAIYASGGATCIVLRDGMTRAPCVRFGTAKRAAELKFFVEDPIKFETLANVFNQSSRFGRLQRIQCAIAGKNLYMRFVCSTGDAMGMNM 378
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH2_SOLLC (3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Solanum lycopersicum GN=HMG2 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.024e-44 Identity = 85/112 (75.89%), Postives = 99/112 (88.39%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + SVPMATTEGCLVAS NRGCKAI+ SGGAT +LL+DGMTRAP VRFG+AKRAAELK F+E+P+ F+ L+ VFN+SSRFARLQ I+CAIAGKNLY++ CSTGDAMGMNM Sbjct: 270 GKEFSVPMATTEGCLVASTNRGCKAIYASGGATCILLRDGMTRAPCVRFGTAKRAAELKFFVEDPIKFESLANVFNQSSRFARLQRIQCAIAGKNLYMRLCCSTGDAMGMNM 381
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH_CATRO (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Catharanthus roseus GN=HMGR PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.746e-44 Identity = 84/112 (75.00%), Postives = 101/112 (90.18%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + +PMATTEGCLVAS NRGCKAI SGGA SVLL+DGMTRAPVVRFG+AKRAAELK ++E+ NF+ +S+VFNKSSRFA+LQ+++CAIAGKNLY++F+CSTGDAMGMNM Sbjct: 262 GREYMLPMATTEGCLVASTNRGCKAILASGGANSVLLRDGMTRAPVVRFGTAKRAAELKFYMEDTQNFETISVVFNKSSRFAKLQSVQCAIAGKNLYIRFSCSTGDAMGMNM 373
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH_MAIZE (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Zea mays GN=HMGR PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.930e-43 Identity = 83/112 (74.11%), Postives = 99/112 (88.39%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + +PMATTEGCLVAS NRGCKAI SGGATSV+L+D MTRAPV RF +A+RAAELK FLE+P NFD LS+VFN+SSRFARLQ ++CA+AG+NLY++F+CSTGDAMGMNM Sbjct: 236 GRRFYLPMATTEGCLVASTNRGCKAIAESGGATSVVLRDAMTRAPVARFPTARRAAELKAFLEDPANFDTLSVVFNRSSRFARLQGVQCAMAGRNLYMRFSCSTGDAMGMNM 347
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH2_ARATH (3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Arabidopsis thaliana GN=HMG2 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.640e-42 Identity = 83/112 (74.11%), Postives = 97/112 (86.61%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G++ SVPMATTEGCLVAS NRG KAIHLSGGA SVL+KD MTRAPVVRF SA+RAA + +L++P NF+ LS++FNKSSRFARLQ+I C IAG+NLY +F CSTGDAMGMNM Sbjct: 229 GVEYSVPMATTEGCLVASTNRGFKAIHLSGGAFSVLVKDAMTRAPVVRFPSARRAALVMFYLQDPSNFERLSLIFNKSSRFARLQSITCTIAGRNLYPRFACSTGDAMGMNM 340
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH3_ORYSJ (3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 OS=Oryza sativa subsp. japonica GN=HMG3 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 4.755e-42 Identity = 82/112 (73.21%), Postives = 97/112 (86.61%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + VPMATTEGCLVAS NRGCKAI SGGA SV+L+DGMTRAPV R +A+RAAELK FLE+ VNF+ LSMVFN+SSRFARLQ ++CA+AG+NLY++F+C TGDAMGMNM Sbjct: 229 GQRFYVPMATTEGCLVASTNRGCKAIAESGGAVSVVLRDGMTRAPVARLPTARRAAELKAFLEDSVNFNTLSMVFNRSSRFARLQGVQCAMAGRNLYMRFSCCTGDAMGMNM 340
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH1_ORYSJ (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Oryza sativa subsp. japonica GN=HMG1 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 8.393e-39 Identity = 77/112 (68.75%), Postives = 91/112 (81.25%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + VPMATTEGCLVAS NRGC+AI SGGA SVLL+D M+RAP V+ SA RAAELK F E P NF+ L+ VFN+SSRF RLQ I+CA+AG+NLY++F+C TGDAMGMNM Sbjct: 200 GREYHVPMATTEGCLVASVNRGCRAISASGGAFSVLLRDAMSRAPAVKLPSAMRAAELKAFAEAPANFELLAAVFNRSSRFGRLQDIRCALAGRNLYMRFSCITGDAMGMNM 311
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH1_ORYSI (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Oryza sativa subsp. indica GN=HMG1 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 8.393e-39 Identity = 77/112 (68.75%), Postives = 91/112 (81.25%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + VPMATTEGCLVAS NRGC+AI SGGA SVLL+D M+RAP V+ SA RAAELK F E P NF+ L+ VFN+SSRF RLQ I+CA+AG+NLY++F+C TGDAMGMNM Sbjct: 207 GREYHVPMATTEGCLVASVNRGCRAISASGGAFSVLLRDAMSRAPAVKLPSAMRAAELKAFAEAPANFELLAAVFNRSSRFGRLQDIRCALAGRNLYMRFSCITGDAMGMNM 318
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH2_DICDI (3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Dictyostelium discoideum GN=hmgB PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 2.615e-32 Identity = 71/112 (63.39%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G VS+PMATTEGCLVAS +RG KAI SGGA +VLL+ GMTRAPV R S+ RA ELK ++EN NF ++ FN +SRFARL++IK IAG+ +YL+F STGDAMGMNM Sbjct: 182 GKLVSIPMATTEGCLVASTHRGAKAITKSGGAKTVLLQSGMTRAPVCRLPSSIRAGELKQWIENQENFYQVASAFNSTSRFARLKSIKVVIAGRLVYLRFKSSTGDAMGMNM 293
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH1_DICDI (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Dictyostelium discoideum GN=hmgA PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.298e-31 Identity = 65/112 (58.04%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G V++PMATTEGCLVAS +RGCKAI SGGA + GMTRAPVVRF +A+E ++ + N+ L VF+ +SRFARL AIKC IAG+++Y++F C TGDAMGMNM Sbjct: 226 GQLVTIPMATTEGCLVASTHRGCKAITESGGAKCTITSRGMTRAPVVRFSDIVKASEFVSWINDTDNYQALKAVFDSTSRFARLSAIKCTIAGRSVYIRFKCDTGDAMGMNM 337 The following BLAST results are available for this feature:
BLAST of CF504597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504597 ID=CF504597; Name=CF504597; organism=Citrus sinensis; type=EST; length=344bpback to top |