CF504597
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH2_GOSHI (3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Gossypium hirsutum GN=HMG2 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 1.057e-49 Identity = 94/112 (83.93%), Postives = 104/112 (92.86%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + SVPMATTEGCLVAS NRGCKAIHLSGGATS+LLKDGMTRAPVVRF +AKRAAELK +LE+P NFD L++VFN+SSRF RLQ+IKCAIAGKNLYL+FTCSTGDAMGMNM Sbjct: 296 GREYSVPMATTEGCLVASTNRGCKAIHLSGGATSILLKDGMTRAPVVRFSTAKRAAELKFYLEDPENFDTLAVVFNRSSRFGRLQSIKCAIAGKNLYLRFTCSTGDAMGMNM 407
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH1_GOSHI (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Gossypium hirsutum GN=HMG1 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 6.850e-49 Identity = 93/112 (83.04%), Postives = 105/112 (93.75%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + SVPMATTEGCLVAS NRGCKAIHLSGGATSVLL+DGMTRAPVVRFG+AKRAA+LKL+LE+P NF+ L+ VFN+SSRFARLQ+IKCAIAGKNLYL+F+C TGDAMGMNM Sbjct: 253 GREYSVPMATTEGCLVASTNRGCKAIHLSGGATSVLLRDGMTRAPVVRFGTAKRAADLKLYLEDPENFETLACVFNRSSRFARLQSIKCAIAGKNLYLRFSCFTGDAMGMNM 364
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH1_HEVBR (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Hevea brasiliensis GN=HMGR1 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 1.168e-48 Identity = 94/112 (83.93%), Postives = 103/112 (91.96%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + SVPMATTEGCLVAS NRGCKAI+LSGGATSVLLKDGMTRAPVVRF SA RAAELK FLE+P NFD L++VFNKSSRFARLQ IKC+IAGKNLY++F+CSTGDAMGMNM Sbjct: 243 GREYSVPMATTEGCLVASTNRGCKAIYLSGGATSVLLKDGMTRAPVVRFASATRAAELKFFLEDPDNFDTLAVVFNKSSRFARLQGIKCSIAGKNLYIRFSCSTGDAMGMNM 354
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH3_SOLTU (3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 OS=Solanum tuberosum GN=HMG3 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 7.573e-48 Identity = 91/112 (81.25%), Postives = 104/112 (92.86%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + SVPMATTEGCLVAS NRGCKAI++SGGATSVL +D MTRAPVVRFGSAKRAAELK F+E+P+NF+ LS+VFNKSSRFARLQ I+CAIAGKNLY++F+CSTGDAMGMNM Sbjct: 245 GKEFSVPMATTEGCLVASTNRGCKAIYVSGGATSVLFRDAMTRAPVVRFGSAKRAAELKFFVEDPMNFETLSVVFNKSSRFARLQNIQCAIAGKNLYMRFSCSTGDAMGMNM 356
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH3_HEVBR (3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 OS=Hevea brasiliensis GN=HMGR3 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 4.909e-47 Identity = 88/112 (78.57%), Postives = 105/112 (93.75%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + +VPMATTEGCLVASANRGCKAI+ SGGATSVLL+DGMTRAPVVRF +AKRAA+LK F+E+P NFD +++VFNKSSRFARLQ+++CAIAGKNLY++F+CSTGDAMGMNM Sbjct: 254 GKEYTVPMATTEGCLVASANRGCKAIYASGGATSVLLRDGMTRAPVVRFPTAKRAADLKFFMEDPDNFDTIAVVFNKSSRFARLQSVQCAIAGKNLYMRFSCSTGDAMGMNM 365
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH_NICSY (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Nicotiana sylvestris GN=HMGR PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.865e-46 Identity = 89/112 (79.46%), Postives = 101/112 (90.18%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + SVPMATTEGCLVAS NRGCKAI+ SGGATSVLL+DGMTRAP VRFG+AKRAAELK F+E+PV F+ L+ VFN+SSRFARLQ I+CAIAGKNLY++F CSTGDAMGMNM Sbjct: 272 GREYSVPMATTEGCLVASTNRGCKAIYASGGATSVLLRDGMTRAPCVRFGTAKRAAELKFFVEDPVKFETLAAVFNQSSRFARLQRIQCAIAGKNLYMRFVCSTGDAMGMNM 383
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH1_SOLTU (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Solanum tuberosum GN=HMG1 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 2.436e-46 Identity = 89/112 (79.46%), Postives = 102/112 (91.07%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + SVPMATTEGCLVAS NRGCKAI +SGGA SVLL+DGMTRAPVVRF +AKRAAELK F+E+P+NF+ LS++FNKSSRFARLQ I+CAIAGKNLY+ F+CSTGDAMGMNM Sbjct: 267 GREYSVPMATTEGCLVASTNRGCKAIFVSGGADSVLLRDGMTRAPVVRFTTAKRAAELKFFVEDPLNFETLSLMFNKSSRFARLQGIQCAIAGKNLYITFSCSTGDAMGMNM 378
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH1_ARATH (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Arabidopsis thaliana GN=HMG1 PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 2.436e-46 Identity = 87/112 (77.68%), Postives = 100/112 (89.29%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + SVPMATTEGCLVAS NRGCKA+ +SGGATS +LKDGMTRAPVVRF SA+RA+ELK FLENP NFD L++VFN+SSRFARLQ++KC IAGKN Y++F CSTGDAMGMNM Sbjct: 254 GYEYSVPMATTEGCLVASTNRGCKAMFISGGATSTVLKDGMTRAPVVRFASARRASELKFFLENPENFDTLAVVFNRSSRFARLQSVKCTIAGKNAYVRFCCSTGDAMGMNM 365
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH2_CAPAN (3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Capsicum annuum GN=HMGR2 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 3.182e-46 Identity = 87/112 (77.68%), Postives = 102/112 (91.07%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + SVPMATTEGCLVAS NRGCKAI+ SGGATS+LL+DGMTRAP VRFG+AKRAAELK F+E+P+NF+ L+ VFN+SSRFARLQ I+CAIAGKNL+++F CSTGDAMGMNM Sbjct: 272 GREYSVPMATTEGCLVASTNRGCKAIYASGGATSILLRDGMTRAPCVRFGTAKRAAELKFFVEDPINFETLANVFNQSSRFARLQRIQCAIAGKNLHMRFVCSTGDAMGMNM 383
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH_CAMAC (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Camptotheca acuminata PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 7.088e-46 Identity = 88/112 (78.57%), Postives = 99/112 (88.39%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + SVPMATTEGCLVAS NRGCKAI GGATSVLL+D MTRAPVVRFGSAKRAA+LK FLENP+NF+ L+ VFN SSRF +LQ IKCAIAGKNLY++++CSTGDAMGMNM Sbjct: 261 GREYSVPMATTEGCLVASTNRGCKAIFACGGATSVLLRDAMTRAPVVRFGSAKRAADLKFFLENPLNFETLAAVFNSSSRFGKLQNIKCAIAGKNLYMRYSCSTGDAMGMNM 372 The following BLAST results are available for this feature:
BLAST of CF504597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504597 ID=CF504597; Name=CF504597; organism=Citrus sinensis; type=EST; length=344bpback to top |