CF504597
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH_MOUSE (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Mus musculus GN=Hmgcr PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 6.441e-31 Identity = 66/112 (58.93%), Postives = 81/112 (72.32%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + VPMATTEGCLVAS NRGC+AI L GGA+S +L DGMTR PVVR A +AE+K +LE P F + F+ +SRFARLQ + +AG+NLY++F TGDAMGMNM Sbjct: 547 GKEYQVPMATTEGCLVASTNRGCRAISLGGGASSRVLADGMTRGPVVRLPRACDSAEVKTWLETPEGFAVIKEAFDSTSRFARLQKLHVTMAGRNLYIRFQSRTGDAMGMNM 658
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH_RABIT (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Oryctolagus cuniculus GN=HMGCR PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.412e-31 Identity = 66/112 (58.93%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + VPMATTEGCLVAS NRGC+AI L GGA+S +L DGMTR PVVR A +AE+K +LE P F + F+ +SRFARLQ + ++AG+NLY++F TGDAMGMNM Sbjct: 548 GKEFQVPMATTEGCLVASTNRGCRAICLGGGASSRVLADGMTRGPVVRLPRACDSAEVKAWLETPEGFAVIKEAFDSTSRFARLQKLHISMAGRNLYIRFQSRTGDAMGMNM 659
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH_MESAU (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Mesocricetus auratus GN=HMGCR PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.412e-31 Identity = 66/112 (58.93%), Postives = 81/112 (72.32%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + VPMATTEGCLVAS NRGC+AI L GGA+S +L DGMTR PVVR A +AE+K +LE P F + F+ +SRFARLQ + +AG+NLY++F TGDAMGMNM Sbjct: 547 GKEYQVPMATTEGCLVASTNRGCRAIGLGGGASSRVLADGMTRGPVVRLPRACDSAEVKAWLETPEGFAVIKDAFDSTSRFARLQKLHVTMAGRNLYIRFQSKTGDAMGMNM 658
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH_CRIGR (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Cricetulus griseus GN=HMGCR PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.412e-31 Identity = 66/112 (58.93%), Postives = 81/112 (72.32%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + VPMATTEGCLVAS NRGC+AI L GGA+S +L DGMTR PVVR A +AE+K +LE P F + F+ +SRFARLQ + +AG+NLY++F TGDAMGMNM Sbjct: 547 GKEYQVPMATTEGCLVASTNRGCRAIGLGGGASSRVLADGMTRGPVVRLPRACDSAEVKAWLETPEGFAVIKDAFDSTSRFARLQKLHVTMAGRNLYIRFQSKTGDAMGMNM 658
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH_PICJA (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Pichia jadinii GN=HMG PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.435e-30 Identity = 65/112 (58.04%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G +PMATTEGCLVASA RGCKAI+L GG T+VL KDGMTR P V+F S KRA + KL+L++ + + FN +SRFARLQ ++ A+AG L+++F TGDAMGMNM Sbjct: 607 GKPYHIPMATTEGCLVASAMRGCKAINLGGGVTTVLTKDGMTRGPCVKFPSLKRAGQCKLWLDSDEGQEEMKKAFNSTSRFARLQHLQTALAGDLLFIRFRTVTGDAMGMNM 718
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH1_YEAST (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Saccharomyces cerevisiae GN=HMG1 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.448e-30 Identity = 64/112 (57.14%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G +PMATTEGCLVASA RGCKAI+ GGAT+VL KDGMTR PVVRF + KR+ K++L++ + + FN +SRFARLQ I+ +AG L+++F +TGDAMGMNM Sbjct: 703 GTSYHIPMATTEGCLVASAMRGCKAINAGGGATTVLTKDGMTRGPVVRFPTLKRSGACKIWLDSEEGQNAIKKAFNSTSRFARLQHIQTCLAGDLLFMRFRTTTGDAMGMNM 814
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH_ASPTN (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_09965 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.453e-30 Identity = 65/112 (58.04%), Postives = 85/112 (75.89%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + +PMATTEG LVASA+RGCKAI+ GGAT++L DGMTR P +RF SA+RAAE + ++E+P+ + L+ FN +SRFARLQ + A AG LY++F +TGDAMGMNM Sbjct: 718 GQALFIPMATTEGVLVASASRGCKAINAGGGATTMLKGDGMTRGPCLRFPSAQRAAEAQRWVESPLGHEVLAAAFNATSRFARLQTLTVAQAGIYLYIRFRTTTGDAMGMNM 829
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH_ASPTE (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Aspergillus terreus PE=3 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 5.453e-30 Identity = 65/112 (58.04%), Postives = 85/112 (75.89%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + +PMATTEG LVASA+RGCKAI+ GGAT++L DGMTR P +RF SA+RAAE + ++E+P+ + L+ FN +SRFARLQ + A AG LY++F +TGDAMGMNM Sbjct: 718 GQALFIPMATTEGVLVASASRGCKAINAGGGATTMLKGDGMTRGPCLRFPSAQRAAEAQRWVESPLGHEVLAAAFNATSRFARLQTLTVAQAGIYLYIRFRTTTGDAMGMNM 829
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH_RAT (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Rattus norvegicus GN=Hmgcr PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 9.301e-30 Identity = 64/112 (57.14%), Postives = 80/112 (71.43%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G + VPMATTEGCLVAS NRGC+AI L GGA+S +L DGM+R PVVR A +AE+K +LE P F + F+ +SRFARLQ + +AG+NLY++ TGDAMGMNM Sbjct: 547 GKEYQVPMATTEGCLVASTNRGCRAISLGGGASSRVLADGMSRGPVVRLPRACDSAEVKSWLETPEGFAVVKEAFDSTSRFARLQKLHVTLAGRNLYIRLQSKTGDAMGMNM 658
BLAST of CF504597 vs. ExPASy Swiss-Prot
Match: HMDH_GIBFU (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Gibberella fujikuroi GN=HMGR PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.301e-30 Identity = 64/112 (57.14%), Postives = 81/112 (72.32%), Query Frame = 1 Query: 7 GLQVSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLKFTCSTGDAMGMNM 342 G +PMATTEG LVASA+RGCKAI+ GGA +VL DGMTR P V F + +RA KL+L++ D + FN +SRFARLQ++K A+AG NLY++F +TGDAMGMNM Sbjct: 607 GQSYFIPMATTEGVLVASASRGCKAINSGGGAITVLTADGMTRGPCVAFETLERAGAAKLWLDSEAGQDMMKKAFNSTSRFARLQSMKTALAGTNLYIRFKTTTGDAMGMNM 718 The following BLAST results are available for this feature:
BLAST of CF504597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504597 ID=CF504597; Name=CF504597; organism=Citrus sinensis; type=EST; length=344bpback to top |