CF510024
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER_SYNP4 (Ferredoxin OS=Synechococcus sp. (strain PCC 7418) PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 2.381e-26 Identity = 56/84 (66.67%), Postives = 64/84 (76.19%), Query Frame = 1 Query: 187 MATYKVKLITP--GGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYP 432 MA+YKV LI G E I PDD +ILD AEE G+DLPYSCRAGACS+C GK+ G +DQS+QSFLDDDQI G+VLTC AYP Sbjct: 1 MASYKVTLINEEMGLNETIEVPDDEYILDVAEEEGIDLPYSCRAGACSTCAGKIKEGEIDQSDQSFLDDDQIEAGYVLTCVAYP 84
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER1_RAPSA (Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.110e-26 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 1 Query: 190 ATYKVKLITPGGEE-EINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYP 432 A YKVKLI P G+E E + PDD +ILDAAEEAG+DLPYSCRAGACS+C GK+ G VDQS+ SFL+D +G+VLTC AYP Sbjct: 2 AVYKVKLIGPDGQENEFDVPDDQYILDAAEEAGVDLPYSCRAGACSTCAGKIEKGQVDQSDGSFLEDHHFEKGYVLTCVAYP 83
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER_RHOPL (Ferredoxin OS=Rhodymenia palmata PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 4.061e-26 Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 196 YKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPT 435 Y V L TPGG EEI + +++LD+AE+ G+DLPYSCRAGACS+C G V GTVDQS+QSFLDDDQ+ + FVLTC AYPT Sbjct: 4 YTVTLSTPGGVEEIEGDETTYVLDSAEDQGIDLPYSCRAGACSTCAGIVELGTVDQSDQSFLDDDQLNDSFVLTCVAYPT 83
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER_PORYE (Ferredoxin OS=Porphyra yezoensis GN=petF PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.543e-25 Identity = 53/85 (62.35%), Postives = 67/85 (78.82%), Query Frame = 1 Query: 187 MATYKVKLITP--GGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPT 435 MA YK+ L+ G + NC +D++ILDAAEE G++LPYSCRAGACS+C GKV GTVDQ++QSFLDDDQ+ G+VLTC AYP+ Sbjct: 1 MADYKIHLLCEEEGIDVTFNCAEDTYILDAAEEEGIELPYSCRAGACSTCAGKVTEGTVDQADQSFLDDDQLLAGYVLTCIAYPS 85
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER1_EQUTE (Ferredoxin-1 OS=Equisetum telmateia PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.543e-25 Identity = 56/79 (70.89%), Postives = 63/79 (79.75%), Query Frame = 1 Query: 196 YKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYP 432 YK L TP GE ++ P+ + ILDAAEEAG DLP+SCRAGACSSC GKVVSG+VDQSE SFLDD Q+ EGFVLTC A P Sbjct: 2 YKTVLKTPSGEFTLDVPEGTTILDAAEEAGYDLPFSCRAGACSSCLGKVVSGSVDQSEGSFLDDGQMEEGFVLTCIAIP 80
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER_PORPU (Ferredoxin OS=Porphyra purpurea GN=petF PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 2.632e-25 Identity = 52/84 (61.90%), Postives = 69/84 (82.14%), Query Frame = 1 Query: 187 MATYKVKLITP--GGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYP 432 MA YK+ L++ G + +C +D++ILDAAEEAG++LPYSCRAGACS+C GKV G+VDQS+QSFLDD+Q+ +G+VLTC AYP Sbjct: 1 MADYKIHLLSEDEGIDVTFDCSEDTYILDAAEEAGIELPYSCRAGACSTCAGKVTEGSVDQSDQSFLDDEQLLKGYVLTCIAYP 84
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER1_EQUAR (Ferredoxin-1 OS=Equisetum arvense PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.438e-25 Identity = 55/79 (69.62%), Postives = 63/79 (79.75%), Query Frame = 1 Query: 196 YKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYP 432 YK L TP GE ++ P+ + ILDAAEEAG DLP+SCRAGACSSC GKVVSG+VD+SE SFLDD Q+ EGFVLTC A P Sbjct: 2 YKTVLKTPSGEFTLDVPEGTTILDAAEEAGYDLPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTCIAIP 80
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER_PORUM (Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.306e-24 Identity = 51/83 (61.45%), Postives = 67/83 (80.72%), Query Frame = 1 Query: 190 ATYKVKLITP--GGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYP 432 A YK+ L++ G + +C +D++ILDAAEE G++LPYSCRAGACS+C GKV GTVDQS+QSFLDD+Q+ +G+VLTC AYP Sbjct: 1 ADYKIHLVSKEEGIDVTFDCSEDTYILDAAEEEGIELPYSCRAGACSTCAGKVTEGTVDQSDQSFLDDEQMLKGYVLTCIAYP 83
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.228e-24 Identity = 57/115 (49.57%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 100 PTATSLKAMPNMGQAIFGLKANRGGRVVAMAT---YKVKLITPGG-EEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYP 432 P A +L + QA R VA A +KVKL+ P G E E PDD++IL+AAE AG++LP+SCRAG+CS+C G++ +G VDQSE SFLDD Q+ EG++LTC +YP Sbjct: 26 PAANTLSFAGHARQAARASGPRLSSRFVASAAAVLHKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYP 140
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER4_ARATH (Probable ferredoxin-4, chloroplastic OS=Arabidopsis thaliana GN=FD4 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.964e-24 Identity = 60/117 (51.28%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 91 RSKPTATSLKAMPNMGQAIFGLKANRG--GRVVAMATYKVKLITPGGEE-EINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYP 432 R P+ L N FGL ++RG G+V A + KVKLI+P GEE EI +D IL++AE AGL+LPYSCR+G C +C GK+VSG VDQS SFL+++QI +G++LTC A P Sbjct: 18 RISPSQAQLTTRLN-NTTYFGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALP 133 The following BLAST results are available for this feature:
BLAST of CF510024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510024 ID=CF510024; Name=CF510024; organism=Citrus sinensis; type=EST; length=436bpback to top |