CF510024
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER2_ARATH (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana GN=FD2 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.098e-47 Identity = 93/129 (72.09%), Postives = 109/129 (84.50%), Query Frame = 1 Query: 58 LSSAMVSTSFIRSKPTATSLKAMPNMG-QAIFGLKAN--RGGRVVAMATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPT 435 LSSA+V TSFIR P SL+++P+ Q++FGLK+ RGGRV AMATYKVK ITP GE E+ C DD ++LDAAEEAG+DLPYSCRAG+CSSC GKVVSG+VDQS+QSFLDD+QIGEGFVLTCAAYPT Sbjct: 6 LSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAAYPT 134
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.028e-45 Identity = 88/129 (68.22%), Postives = 110/129 (85.27%), Query Frame = 1 Query: 58 LSSAMVSTSFIRSKPTATSLKAMPNMG-QAIFGLKAN--RGGRVVAMATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPT 435 LSSA+VSTSF+R + T SL+++P Q++FGLK++ RGGRV AMATYKVK ITP GE+E+ C +D ++LDAAEEAGLDLPYSCRAG+CSSC GKVVSG++DQS+QSFLDD+Q+ EG+VLTC AYPT Sbjct: 6 LSSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPT 134
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 5.102e-45 Identity = 82/128 (64.06%), Postives = 104/128 (81.25%), Query Frame = 1 Query: 49 MATLSSAMVSTSFIRSKPTATSLKAMPNMGQAIFGLKANRGGRVVAMATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYP 432 MA++S+ M+STSF+ KP TSLK +PN+G+A+FGLK+ GG+V MA+YKVKLITP G E +CPD+ +ILD AEEAG DLPYSCRAG+CSSC GK+ G VDQ++ +FLDDDQ+ EG+VLTC AYP Sbjct: 1 MASVSATMISTSFMPRKPAVTSLKPIPNVGEALFGLKSANGGKVTCMASYKVKLITPDGPIEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYP 128
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER1_SOLLC (Ferredoxin-1, chloroplastic OS=Solanum lycopersicum GN=SEND33 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.137e-44 Identity = 83/128 (64.84%), Postives = 101/128 (78.91%), Query Frame = 1 Query: 49 MATLSSAMVSTSFIRSKPTATSLKAMPNMGQAIFGLKANRGGRVVAMATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYP 432 MA++S M+STSF+ KP TSLKA+ N+G+A+FGLK+ R GR+ MA+YKVKLITP G E CPDD +ILD AEE G DLPYSCRAG+CSSC GKV +G+VDQS+ +FLD+DQ GFVLTC AYP Sbjct: 1 MASISGTMISTSFLPRKPAVTSLKAISNVGEALFGLKSGRNGRITCMASYKVKLITPEGPIEFECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGSVDQSDGNFLDEDQEAAGFVLTCVAYP 128
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 4.042e-42 Identity = 86/134 (64.18%), Postives = 106/134 (79.10%), Query Frame = 1 Query: 40 AATMATLSSAMVSTSFIRSKPTATSLKAMP-NMGQAIFGLKANRG-GRVVAMATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPT 435 AAT A LS A +ST+F P T+ A+P N+G+A+FGLK++ GRV AMA YKV L+TP G++E+ CPDD +ILDAAEEAG+DLPYSCRAG+CSSC GKV SG+V+Q + SFLDDDQI EG+VLTC AYPT Sbjct: 2 AATTAALSGATMSTAFAPKTPPMTA--ALPTNVGRALFGLKSSASRGRVTAMAAYKVTLVTPEGKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPT 133
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER_SILPR (Ferredoxin, chloroplastic OS=Silene pratensis GN=PETF PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 4.183e-39 Identity = 80/129 (62.02%), Postives = 96/129 (74.42%), Query Frame = 1 Query: 52 ATLSSAMVSTSFIRSKPTATSLKAMPNMGQAIFGLKANRGGRVVAMATYKVKLITP-GGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPT 435 +TLS+ VS S + + + NMGQA+FGLKA GRV AMATYKV LIT G +CPDD ++LD AEE G+DLPYSCRAG+CSSC GKVV+G+VDQS+QSFLDDDQI G+VLTCAAYP+ Sbjct: 3 STLSTLSVSASLLPKQQPMVASSLPTNMGQALFGLKAGSRGRVTAMATYKVTLITKESGTVTFDCPDDVYVLDQAEEEGIDLPYSCRAGSCSSCAGKVVAGSVDQSDQSFLDDDQIEAGWVLTCAAYPS 131
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER1_PEA (Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PETF PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 4.625e-38 Identity = 78/133 (58.65%), Postives = 91/133 (68.42%), Query Frame = 1 Query: 43 ATMATLSSAMVSTSFIRSKPTATSLKAMPNMGQAIFGLKAN--RGGRVVAMATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPT 435 AT L VSTSF+R++P S+ GLK + RG VAMA+YKVKL+TP G +E CP D +ILD AEE G+DLPYSCRAG+CSSC GKVV G VDQS+ SFLDD+QI GFVLTC AYPT Sbjct: 2 ATTPALYGTAVSTSFLRTQPMPMSVTTTKAFSNGFLGLKTSLKRGDLAVAMASYKVKLVTPDGTQEFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQIEAGFVLTCVAYPT 134
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER1_SPIOL (Ferredoxin-1, chloroplastic OS=Spinacia oleracea GN=PETF PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 3.315e-36 Identity = 76/133 (57.14%), Postives = 99/133 (74.44%), Query Frame = 1 Query: 40 AATMATLSSAMVSTSFIRSKPTATSLKAMP-NMGQAIFGLKA-NRGGRVVAMATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYP 432 AAT T+ ++T+F+ + A+P N G+++FGLK +RGGR+ MA YKV L+TP G E CPDD +ILDAAEE G+DLPYSCRAG+CSSC GK+ +G+++Q +QSFLDDDQI EG+VLTCAAYP Sbjct: 2 AATTTTMMG--MATTFVPKPQAPPMMAALPSNTGRSLFGLKTGSRGGRMT-MAAYKVTLVTPTGNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYP 131
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER3_RAPSA (Ferredoxin, leaf L-A OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.148e-35 Identity = 67/82 (81.71%), Postives = 75/82 (91.46%), Query Frame = 1 Query: 190 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPT 435 ATYKVK ITP GE+E+ C DD ++LDAAEEAG+DLPYSCRAG+CSSC GKVVSG+VDQS+QSFLDDDQI EGFVLTCAAYPT Sbjct: 1 ATYKVKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIAEGFVLTCAAYPT 82
BLAST of CF510024 vs. ExPASy Swiss-Prot
Match: FER_BRANA (Ferredoxin OS=Brassica napus PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.066e-34 Identity = 66/82 (80.49%), Postives = 74/82 (90.24%), Query Frame = 1 Query: 190 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPT 435 ATYKVK ITP GE+E+ C DD ++LDAAEEAG+DLPYSCRAG+CSSC GKVVSG VDQS++SFLDDDQI EGFVLTCAAYPT Sbjct: 1 ATYKVKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYPT 82 The following BLAST results are available for this feature:
BLAST of CF510024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF510024 ID=CF510024; Name=CF510024; organism=Citrus sinensis; type=EST; length=436bpback to top |