CF831999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_LACLM (50S ribosomal protein L19 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rplS PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.784e-16 Identity = 40/86 (46.51%), Postives = 63/86 (73.26%), Query Frame = -1 Query: 426 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 680 +IPD +PG V++ + E R R+ +G+VIAR+N+GI+ T+ +R++ GVGVE +FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 15 DIPDFRPGDTVRVHAKVVEGTRERIQIFEGVVIARKNSGINETYTVRKISNGVGVERIFPVHTPRVEKIEVIRHGKVRRAKLYYLR 100
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_THEM4 (50S ribosomal protein L19 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rplS PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16 Identity = 44/89 (49.44%), Postives = 64/89 (71.91%), Query Frame = -1 Query: 423 REIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVA-GVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 683 +E+P+ +PG V++ V E NK R +GIVI+ R +G+ TF +RR+ A G+GVE +FPLY+P I +I+V+ + KVRRAKLYYLR+ Sbjct: 16 KEVPEFRPGDTVRVYVKFKEGNKERTQAFEGIVISLRGSGVGKTFTVRRIGANGIGVERIFPLYAPIIEKIEVVRRGKVRRAKLYYLRN 104
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_RUBXD (50S ribosomal protein L19 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rplS PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16 Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = -1 Query: 417 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 686 +R +PD KPG ++++ V+ N+ R +G+ IARR +GIS TF +R+ GV VE +FPL+SP I IKV+ + RRAKLYY+R+K+ Sbjct: 9 ERGVPDFKPGDTIRVEYRVVEGNRERTQAFEGLCIARRGSGISQTFVVRKNSFGVDVERIFPLHSPKIAGIKVISRGAPRRAKLYYIREKV 99
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_HELMI (50S ribosomal protein L19 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rplS PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16 Identity = 43/89 (48.31%), Postives = 63/89 (70.79%), Query Frame = -1 Query: 423 QREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 686 +++IPD KPG V++ V + E N+ R+ +GIVI RR G+S TF +RR+ GV VE F ++SP + +I+V+ + +VRRAKLYYLRD Sbjct: 14 RKDIPDFKPGDTVKVHVKVVEGNRERIQLFEGIVIKRRGGGLSETFTVRRVSYGVAVERTFLVHSPRLDKIEVVRRGRVRRAKLYYLRD 102
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_DESRM (50S ribosomal protein L19 OS=Desulfotomaculum reducens (strain MI-1) GN=rplS PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16 Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = -1 Query: 426 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 686 ++E+P +PG +++ VI N+ R+ +G+VI RR G+S TF +RR+ GVGVE FPL++P I I+V+ + KVRRA+LYYLR Sbjct: 13 KKELPSFRPGDTIKVNYKVIEGNRERIQAFEGVVIRRRGGGLSETFTVRRISYGVGVERTFPLHAPKIDSIEVVRRGKVRRARLYYLR 100
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_SYNY3 (50S ribosomal protein L19 OS=Synechocystis sp. (strain PCC 6803) GN=rplS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.454e-16 Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = -1 Query: 417 QREIPDIKPGYIVQLKVVIPEN-KRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 686 + ++P I G +++ V I E K R+ +G VIA+RN GIS T +R++ GVGVE +F L+SP + IKVL + KVRRAKLYYLRD++ Sbjct: 18 KEDLPTIHVGDTIKVGVKIVEGGKERIQPYEGTVIAKRNGGISETITVRKIFQGVGVERVFLLHSPRVASIKVLRRGKVRRAKLYYLRDRV 108
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_SPHWW (50S ribosomal protein L19 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rplS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.454e-16 Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = -1 Query: 420 REIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 683 + IPD +PG +++ V + E +R RV +G+ IAR N G+ ++F +R++ G GVE +FPLYSPN+ I+V+ K VRRAKLYYLR + Sbjct: 19 KSIPDFRPGDTLRVGVKVVEGERTRVQAYEGVCIARANKGMGSSFTVRKISFGEGVERVFPLYSPNVESIEVVRKGVVRRAKLYYLRGR 107
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_GEOMG (50S ribosomal protein L19 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rplS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.454e-16 Identity = 42/88 (47.73%), Postives = 63/88 (71.59%), Query Frame = -1 Query: 426 QREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 686 ++ IP KPG V++ V I E +K R+ +G+VIAR+N GI +F +R++ G+GVE +FPL+SP++ I+V+ + VRRAKLYYLR Sbjct: 13 KKNIPPFKPGDTVKVHVKIVEGDKSRIQAFQGVVIARQNGGIRESFTVRKISNGIGVERVFPLHSPSLDAIEVITRGHVRRAKLYYLR 100
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_CORJK (50S ribosomal protein L19 OS=Corynebacterium jeikeium (strain K411) GN=rplS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.454e-16 Identity = 42/88 (47.73%), Postives = 62/88 (70.45%), Query Frame = -1 Query: 420 EIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 680 +IP+ + G + + V VI +K R+ +G+VI R+N+GI TF +R++ G+GVE FP++SPNI I VL + KVRRAKLYYLR++ Sbjct: 15 DIPEFRAGDTLDVHVKVIEGSKSRLQVFRGVVIRRQNSGIRETFTIRKVSFGIGVERTFPVHSPNIDRIDVLSRGKVRRAKLYYLRER 102
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_CARHZ (50S ribosomal protein L19 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.454e-16 Identity = 40/88 (45.45%), Postives = 64/88 (72.73%), Query Frame = -1 Query: 426 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 686 ++++P+ +PG V++ VI N+ R+ +G+VI +R +G+S TF +RR+ G+GVE FPL+SP I +I+V+ + KVRRA+LYYLR Sbjct: 13 RKDLPEFRPGDTVKVYFKVIEGNRERIQPYEGVVIRKRGSGLSATFTVRRVSYGIGVERTFPLHSPRIEKIEVIRRGKVRRARLYYLR 100 The following BLAST results are available for this feature:
BLAST of CF831999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831999 ID=CF831999; Name=CF831999; organism=Citrus sinensis; type=EST; length=689bpback to top |