CF831999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RK19_SPIOL (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea GN=RPL19 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28 Identity = 59/89 (66.29%), Postives = 76/89 (85.39%), Query Frame = -1 Query: 417 REIPDIKPGYIVQLKVVIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 683 R +P I+ G IVQ+++ +PENKRR+S KGIVI+R+NAGI TT R+RR++AGVGVE +FPLYSPNI EIKV+ +KVR+A+LYYLRDKL Sbjct: 138 RPVPGIRTGDIVQIRLEVPENKRRLSVYKGIVISRQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRKARLYYLRDKL 226
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RK191_ARATH (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana GN=At4g17560 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.309e-28 Identity = 57/89 (64.04%), Postives = 77/89 (86.52%), Query Frame = -1 Query: 417 REIPDIKPGYIVQLKVVIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 683 R +P+I+ G IV++K+ +PENKRR+S KGIV++R+NAGI TT R+RR++AG+GVE +FP+YSPNI EIKV+ +KVRRA+LYYLRDKL Sbjct: 130 RPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKL 218
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RK192_ARATH (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana GN=At5g47190 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.638e-27 Identity = 56/89 (62.92%), Postives = 76/89 (85.39%), Query Frame = -1 Query: 417 REIPDIKPGYIVQLKVVIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 683 R +P ++ G IV++K+ +PENKRR+S KGIV++R+NAGI TT R+RR++AG+GVE +FP+YSPNI EIKV+ +KVRRA+LYYLRDKL Sbjct: 134 RPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKL 222
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_CALS8 (50S ribosomal protein L19 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=rplS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18 Identity = 45/91 (49.45%), Postives = 66/91 (72.53%), Query Frame = -1 Query: 417 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 686 +++IPD KPG V++ VI + R+ +G+VI RR G+S TF +RR+ GVGVE +FPL+SP I +I+V+ + KVRRAKLYY+R+K+ Sbjct: 13 RKDIPDFKPGDTVRVHFKVIEGGRERIQAFEGLVIKRRGKGLSETFTVRRISYGVGVERVFPLHSPRIEKIEVIRRGKVRRAKLYYIREKI 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ANATD (50S ribosomal protein L19 OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rplS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18 Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = -1 Query: 417 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 686 +++IPD KPG V++ VI + RV +G+VI RR G+S TF +RR+ G+GVE +FPL+SP + +I+V+ + KVRRAKLYY+R+K+ Sbjct: 13 RKDIPDFKPGDTVRVYFKVIEGGRERVQAFEGLVIKRRGKGLSETFTVRRISYGIGVERVFPLHSPRLEKIEVIRRGKVRRAKLYYIREKI 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_THENN (50S ribosomal protein L19 OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=rplS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17 Identity = 49/98 (50.00%), Postives = 70/98 (71.43%), Query Frame = -1 Query: 399 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVA-GVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKLNPLRNK 686 ++EIPD +PG V++ V VI ++ R +GIVIA+R +GI+ TF +RR+ + GVGVE +FP +SP + +I+V+ K KVRRAKLYYLRD +R K Sbjct: 16 KKEIPDFRPGDTVRVHVKVIEGDRERTQVFEGIVIAKRGSGINRTFTVRRIGSHGVGVERIFPFHSPVVEKIEVVRKGKVRRAKLYYLRDVKGKIRIK 113
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_CYAP4 (50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplS PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 45/88 (51.14%), Postives = 64/88 (72.73%), Query Frame = -1 Query: 417 IPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 677 +P+I G V++ V+I E NK R +GIVIA+RN+GI+ T +RR+ GVGVE +F L+SP + IK++ + KVRRAKLYYLRD++ Sbjct: 19 LPEIHVGDTVKVGVIIQEGNKERTQPYEGIVIAKRNSGINATITVRRIFQGVGVERVFLLHSPRVESIKIIKRGKVRRAKLYYLRDRV 106
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BACST (50S ribosomal protein L19 OS=Bacillus stearothermophilus GN=rplS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 42/87 (48.28%), Postives = 64/87 (73.56%), Query Frame = -1 Query: 423 EIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680 ++PD +PG V++ V + E N+ R+ +G+VI RR AGIS TF +R++ GVGVE FP+++P I +++V+ + KVRRAKLYYLR+ Sbjct: 16 DLPDFRPGDTVRVHVKVVEGNRERIQVFEGVVIKRRGAGISETFTVRKVSYGVGVERTFPVHTPKIAKLEVIRRGKVRRAKLYYLRE 102
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_THESQ (50S ribosomal protein L19 OS=Thermotoga sp. (strain RQ2) GN=rplS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.422e-17 Identity = 48/98 (48.98%), Postives = 71/98 (72.45%), Query Frame = -1 Query: 399 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVA-GVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKLNPLRNK 686 ++EIPD +PG V++ V VI ++ R +GIVIA+R +GI+ TF +RR+ + GVGVE +FP++SP + +I+V+ K KVRRAKLYYLR+ +R K Sbjct: 14 KKEIPDFRPGDTVRVHVKVIEGDRERTQVFEGIVIAKRGSGINKTFTVRRIGSHGVGVERIFPVHSPVVEKIEVVRKGKVRRAKLYYLRNVRGKIRIK 111
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_THEP1 (50S ribosomal protein L19 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rplS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.422e-17 Identity = 48/98 (48.98%), Postives = 71/98 (72.45%), Query Frame = -1 Query: 399 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVA-GVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKLNPLRNK 686 ++EIPD +PG V++ V VI ++ R +GIVIA+R +GI+ TF +RR+ + GVGVE +FP++SP + +I+V+ K KVRRAKLYYLR+ +R K Sbjct: 14 KKEIPDFRPGDTVRVHVKVIEGDRERTQVFEGIVIAKRGSGINKTFTVRRIGSHGVGVERIFPVHSPVVEKIEVVRKGKVRRAKLYYLRNVRGKIRIK 111 The following BLAST results are available for this feature:
BLAST of CF831999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831999 ID=CF831999; Name=CF831999; organism=Citrus sinensis; type=EST; length=689bpback to top |