CF831999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_MYCA5 (50S ribosomal protein L19 OS=Mycoplasma arthritidis (strain 158L3-1) GN=rplS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.916e-13 Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 423 EIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680 ++P+I+ GY V++ V I E NK R+ +G+VIA GI+ + +R+ GVGVE +F L SP I I+V KVRRAKLYY+RD Sbjct: 17 DLPEIREGYNVKVHVRIKEGNKERIQVFEGLVIASYGTGINKSITVRKDSYGVGVERIFKLNSPLIAHIEVTRINKVRRAKLYYMRD 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_DIAST (50S ribosomal protein L19 OS=Diaphorobacter sp. (strain TPSY) GN=rplS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.916e-13 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = -1 Query: 420 REIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 683 + IP PG V + V V+ ++RV +G+VIA+RN G+++ F +R++ +G GVE F YSP I I+V + VRRAKLYYLR++ Sbjct: 17 KTIPSFAPGDTVIVNVNVVEGTRKRVQAYEGVVIAKRNRGLNSGFTVRKISSGEGVERTFQTYSPLIASIEVKRRGDVRRAKLYYLRER 105
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_CHLSY (50S ribosomal protein L19 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rplS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.916e-13 Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = -1 Query: 420 EIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVA-GVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 680 +IP+ + G V++ V + E N+ RV +G+VI RR GI+ F +RR+ + G+GVE F L++P I IKV+ + KVRRAKLYYLR + Sbjct: 17 DIPEFRVGDTVRVGVKVVEGNRERVQDFEGVVIRRRGEGINENFTVRRIASHGIGVERTFLLHAPRIDSIKVIRQGKVRRAKLYYLRGR 105
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_CHLAA (50S ribosomal protein L19 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rplS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.916e-13 Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = -1 Query: 420 EIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVA-GVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 680 +IP+ + G V++ V + E N+ RV +G+VI RR GI+ F +RR+ + G+GVE F L++P I IKV+ + KVRRAKLYYLR + Sbjct: 17 DIPEFRVGDTVRVGVKVVEGNRERVQDFEGVVIRRRGEGINENFTVRRIASHGIGVERTFLLHAPRIDSIKVIRQGKVRRAKLYYLRGR 105
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BARQU (50S ribosomal protein L19 OS=Bartonella quintana GN=rplS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.916e-13 Identity = 38/89 (42.70%), Postives = 60/89 (67.42%), Query Frame = -1 Query: 426 SQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 689 ++R++P + G V++ V + E R RV +G+ IAR G++ TF +R++ G GVE +FP+YSP I ++++ + KVRRAKLYYLR Sbjct: 17 AKRQLPKFQAGDTVRVMVRVTEGTRTRVQAYEGVCIARSGGGLNETFTVRKISYGEGVERVFPVYSPLIEGVELVRRGKVRRAKLYYLR 105
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_AKKM8 (50S ribosomal protein L19 OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=rplS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.916e-13 Identity = 35/73 (47.95%), Postives = 54/73 (73.97%), Query Frame = -1 Query: 417 VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 635 VI K R+ +GIVIA+R +GI+ F +R++ G GVE +FPL++P I +I+V+++ KVRRAKL+YLR ++ Sbjct: 31 VIEGGKERIQIFQGIVIAKRGSGINEAFTVRKISYGEGVERVFPLHTPRIAKIEVVNRGKVRRAKLHYLRGRI 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ACISJ (50S ribosomal protein L19 OS=Acidovorax sp. (strain JS42) GN=rplS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.916e-13 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = -1 Query: 420 REIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 683 + IP PG V + V V+ ++RV +G+VIA+RN G+++ F +R++ +G GVE F YSP I I+V + VRRAKLYYLR++ Sbjct: 17 KTIPSFAPGDTVIVNVNVVEGTRKRVQAYEGVVIAKRNRGLNSGFTVRKISSGEGVERTFQTYSPLIASIEVKRRGDVRRAKLYYLRER 105
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_PROAC (50S ribosomal protein L19 OS=Propionibacterium acnes GN=rplS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = -1 Query: 420 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 680 +IP+ +PG V++ V + E R RV GIVI+R G+ +F +R+L G GVE FPL+SP I +I+V VRRAKLYYLR + Sbjct: 16 DIPEFRPGDSVKVHVKVVEGSRTRVQVFSGIVISRTGGGVQESFTVRKLSFGTGVERTFPLHSPIIDKIEVDRHGAVRRAKLYYLRGR 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_POLSQ (50S ribosomal protein L19 OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=rplS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = -1 Query: 420 SQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 689 + + +P PG V + V + E R R +G+VIA+RN G++++F +R++ +G GVE F YSP I I+V + VRRAKLYYLRD+ Sbjct: 17 ANKTLPSFAPGDTVVVGVNVVEGARKRTQAFEGVVIAKRNRGLNSSFIVRKISSGEGVERTFQTYSPLIASIEVKRRGDVRRAKLYYLRDR 107
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_METPP (50S ribosomal protein L19 OS=Methylibium petroleiphilum (strain PM1) GN=rplS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = -1 Query: 420 REIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 683 + IP PG V + V V+ ++R+ +G+VIA+RN G++++F +R++ +G GVE F LYSP I I+V + VRRAKLYYLR + Sbjct: 17 KTIPAFAPGDTVIVSVNVVEGTRKRLQAYEGVVIAKRNRGLNSSFIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRQR 105 The following BLAST results are available for this feature:
BLAST of CF831999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831999 ID=CF831999; Name=CF831999; organism=Citrus sinensis; type=EST; length=689bpback to top |