CF831999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_JANSC (50S ribosomal protein L19 OS=Jannaschia sp. (strain CCS1) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = -1 Query: 420 REIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNA-GISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 683 ++IPD K G V++ + E R RV +G+ IAR+N GI+ +F +R++ G GVE +FPL+S NI I V+ + +VRRAKLYYLR + Sbjct: 17 KDIPDFKAGDTVRVGFRVTEGTRTRVQNYEGVCIARKNGHGIAGSFTVRKISFGEGVERVFPLHSTNIDSITVIRRGRVRRAKLYYLRSR 106
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_FUSNN (50S ribosomal protein L19 OS=Fusobacterium nucleatum subsp. nucleatum GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = -1 Query: 426 EIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 680 +IP K G + + + E NK RV +G+VI G++ TF +R++ AG+GVE + P+ SPNI I+VL +VRR+KLYYLR Sbjct: 17 DIPQFKAGDTIGVYYKVKEGNKERVQLFEGVVIRVNGGGVAKTFTVRKVTAGIGVERIIPVNSPNIDRIEVLKVGRVRRSKLYYLR 102
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ESCF3 (50S ribosomal protein L19 OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 36/90 (40.00%), Postives = 61/90 (67.78%), Query Frame = -1 Query: 420 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 686 ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 14 KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ECOUT (50S ribosomal protein L19 OS=Escherichia coli (strain UTI89 / UPEC) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 36/90 (40.00%), Postives = 61/90 (67.78%), Query Frame = -1 Query: 420 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 686 ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 14 KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ECOSM (50S ribosomal protein L19 OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 36/90 (40.00%), Postives = 61/90 (67.78%), Query Frame = -1 Query: 420 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 686 ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 14 KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ECOSE (50S ribosomal protein L19 OS=Escherichia coli (strain SE11) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 36/90 (40.00%), Postives = 61/90 (67.78%), Query Frame = -1 Query: 420 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 686 ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 14 KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ECOLU (50S ribosomal protein L19 OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 36/90 (40.00%), Postives = 61/90 (67.78%), Query Frame = -1 Query: 420 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 686 ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 14 KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ECOLI (50S ribosomal protein L19 OS=Escherichia coli (strain K12) GN=rplS PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 36/90 (40.00%), Postives = 61/90 (67.78%), Query Frame = -1 Query: 420 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 686 ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 14 KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ECOLC (50S ribosomal protein L19 OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 36/90 (40.00%), Postives = 61/90 (67.78%), Query Frame = -1 Query: 420 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 686 ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 14 KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ECOL6 (50S ribosomal protein L19 OS=Escherichia coli O6 GN=rplS PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 36/90 (40.00%), Postives = 61/90 (67.78%), Query Frame = -1 Query: 420 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 686 ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 14 KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103 The following BLAST results are available for this feature:
BLAST of CF831999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831999 ID=CF831999; Name=CF831999; organism=Citrus sinensis; type=EST; length=689bpback to top |