CF831999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ECO55 (50S ribosomal protein L19 OS=Escherichia coli (strain 55989 / EAEC) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 36/90 (40.00%), Postives = 61/90 (67.78%), Query Frame = -1 Query: 420 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 686 ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 14 KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ECO45 (50S ribosomal protein L19 OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 36/90 (40.00%), Postives = 61/90 (67.78%), Query Frame = -1 Query: 420 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 686 ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 14 KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ECO27 (50S ribosomal protein L19 OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 36/90 (40.00%), Postives = 61/90 (67.78%), Query Frame = -1 Query: 420 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 686 ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 14 KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ECO24 (50S ribosomal protein L19 OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 36/90 (40.00%), Postives = 61/90 (67.78%), Query Frame = -1 Query: 420 QREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 686 ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 14 KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_CLOCE (50S ribosomal protein L19 OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = -1 Query: 417 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 680 ++P ++ G +++ I E R R+ +G VIA + +G+ TF +RR+ GVGVE +FP+ SP + I V+ K VRRAKLYYLRD++ Sbjct: 15 DLPKLEIGDFIKVHAKIKEGTRERIQVFEGTVIALKGSGLKETFTVRRISYGVGVERVFPVNSPRVDRIDVVRKGVVRRAKLYYLRDRV 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_CHLPD (50S ribosomal protein L19 OS=Chlorobium phaeobacteroides (strain DSM 266) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = -1 Query: 420 SQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 689 ++ + P I PG V++++ VI K R+ +G+VI+ R AG S T +R++ GVGVE + P+ SPNI I VL K RRAKL+YLR + Sbjct: 13 ARNDFPAINPGDTVKIQLKVIEGEKERLQAFEGVVISDRGAGGSKTITVRKISHGVGVERIIPVNSPNIESITVLKHGKARRAKLFYLRKR 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_CHLAD (50S ribosomal protein L19 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = -1 Query: 420 EIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVA-GVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 680 +IP+ + G V++ V + E N+ RV +G+VI RR GI+ F +RR+ + G+GVE F L++P I IKV+ + KVRRAKLYYLR + Sbjct: 17 DIPEFRVGDTVRVGVKVVEGNRERVQDFEGVVIRRRGEGINENFTVRRIASHGIGVERTFLLHAPRIDYIKVIRQGKVRRAKLYYLRGR 105
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BURVG (50S ribosomal protein L19 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = -1 Query: 420 REIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 683 + IP+ PG V + V V+ N++RV +G+VIA RN G+++ F +R++ +G GVE F YSP + I V + VRRAKLYYLR++ Sbjct: 19 KTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLNSNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRER 107
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BURA4 (50S ribosomal protein L19 OS=Burkholderia ambifaria (strain MC40-6) GN=rplS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = -1 Query: 420 REIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 683 + IP+ PG V + V V+ N++RV +G+VIA RN G+++ F +R++ +G GVE F YSP + I V + VRRAKLYYLR++ Sbjct: 19 KTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLNSNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRER 107
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RK19_NEPOL (50S ribosomal protein L19, chloroplastic OS=Nephroselmis olivacea GN=rpl19 PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 37/90 (41.11%), Postives = 62/90 (68.89%), Query Frame = -1 Query: 417 REIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 683 R +P I G +V++ ++I E +K RV T +G VI++ AG+++T +R+ GVG+E +F LYSP ++ ++ + K RRAKLYYLR+++ Sbjct: 15 RPLPAIAVGDLVKVGLLILEGDKERVQTYEGTVISKHRAGLNSTITVRKTFQGVGIERVFCLYSPRMVFVEFIRHSKARRAKLYYLRNRV 104 The following BLAST results are available for this feature:
BLAST of CF831999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831999 ID=CF831999; Name=CF831999; organism=Citrus sinensis; type=EST; length=689bpback to top |