CF832372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: TYDC1_ORYSJ (Tyrosine decarboxylase 1 OS=Oryza sativa subsp. japonica GN=Os07g0437500 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26 Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = -3 Query: 272 VVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGW 703 VVD+KDWQI L RFRSLKLW V+R YG NL+ ++ H+++A+ FE+L+ D RFE+V P F+ VCFR+ P S + N +++ +N+ GK +++H VL G + +RFA G LTE+RHV W Sbjct: 354 VVDFKDWQIPLGRRFRSLKLWMVLRLYGVDNLQSYIRKHIHLAEHFEQLLLSDSRFEVVTPRTFSLVCFRLVPPT---------------SDHENGRKLNYDMMDGVNSSGKIFLSHTVLSGKFVLRFAVGAPLTEERHVDAAW 482
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: TYDC1_PETCR (Tyrosine decarboxylase 1 (Fragment) OS=Petroselinum crispum GN=TYRDC-1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21 Identity = 54/109 (49.54%), Postives = 69/109 (63.30%), Query Frame = -3 Query: 380 QVVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWIN 706 +VVDYKDWQI LS RFR+LKLWFV+R+YG LR F+ HV MAK FE LV D RFE+V P F+ VCFR+ PS ++ + ++NE N +LL +N Sbjct: 333 KVVDYKDWQIMLSRRFRALKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVGMDNRFEVVAPRLFSMVCFRIKPSAMIGK-----------NDEDEVNEINRKLLESVN 430
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DDC_MANSE (Aromatic-L-amino-acid decarboxylase OS=Manduca sexta GN=Ddc PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.638e-19 Identity = 55/155 (35.48%), Postives = 78/155 (50.32%), Query Frame = -3 Query: 233 DYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQPLEAFQRA 697 DY+ WQI L RFRSLKLWFV+R YG NL+ ++ + A LFERL++ D+RFE+ VCFR+ S NE N ELL IN GK ++ + + +Y +R A TE+ + V W ++ L F ++ Sbjct: 343 DYRHWQIPLGRRFRSLKLWFVLRLYGVENLQKYIRKQIGFAHLFERLLTSDERFELFEEVTMGLVCFRLKGS----------------------NEINEELLRRINGRGKIHLVPSKVDDVYFLRLAICSRFTEESDMHVSWEEIKDRLMMFLKS 475
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DDC_MOUSE (Aromatic-L-amino-acid decarboxylase OS=Mus musculus GN=Ddc PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.012e-16 Identity = 54/159 (33.96%), Postives = 71/159 (44.65%), Query Frame = -3 Query: 227 VVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQPLEAFQRAFK 703 + DY+ WQI L RFRSLK+WFV R YG L+ ++ HV ++ FE LV D RFEI VCFR+ S NE N LL IN+ K ++ L + +RFA E HV + W + + RA K Sbjct: 343 ITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVELSHEFESLVRQDPRFEICTEVILGLVCFRLKGS----------------------NELNETLLQRINSAKKIHLVPCRLRDKFVLRFAVCARTVESAHVQLAWEHISDLASSVLRAEK 479
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DDC_RAT (Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus GN=Ddc PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.167e-15 Identity = 53/159 (33.33%), Postives = 72/159 (45.28%), Query Frame = -3 Query: 227 VVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQPLEAFQRAFK 703 + DY+ WQI L RFRSLK+WFV R YG L+ ++ HV ++ FE LV D RFEI VCFR+ S N+ N LL IN+ K ++ L + +RFA E HV + W ++ + RA K Sbjct: 343 ITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVKLSHEFESLVRQDPRFEICTEVILGLVCFRLKGS----------------------NQLNETLLQRINSAKKIHLVPCRLRDKFVLRFAVCSRTVESAHVQLAWEHIRDLASSVLRAEK 479
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DDC_BOVIN (Aromatic-L-amino-acid decarboxylase OS=Bos taurus GN=DDC PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.167e-15 Identity = 52/157 (33.12%), Postives = 71/157 (45.22%), Query Frame = -3 Query: 233 VVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQPLEAFQRA 703 + DY+ WQ+ L RFRSLK+WFV R YG L+ ++ HV ++ FE LV D RFEI VCFR+ S N+ N LL IN+ K ++ L + +RFA E HV + W +Q+ RA Sbjct: 343 ITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHAFEALVRQDTRFEICAEVILGLVCFRLKGS----------------------NKLNEALLESINSAKKIHLVPCSLRDRFVLRFAICSRTVELAHVQLAWEHIQEMAATVLRA 477
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DDC_HUMAN (Aromatic-L-amino-acid decarboxylase OS=Homo sapiens GN=DDC PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 50/149 (33.56%), Postives = 68/149 (45.64%), Query Frame = -3 Query: 257 VVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQ 703 + DY+ WQI L RFRSLK+WFV R YG L+ ++ HV ++ FE LV D RFEI VCFR+ S N+ N LL IN+ K ++ L + +RFA E HV W +++ Sbjct: 343 ITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFESLVRQDPRFEICVEVILGLVCFRLKGS----------------------NKVNEALLQRINSAKKIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKE 469
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DDC_CAVPO (Aromatic-L-amino-acid decarboxylase OS=Cavia porcellus GN=DDC PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14 Identity = 51/149 (34.23%), Postives = 66/149 (44.30%), Query Frame = -3 Query: 257 VVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQ 703 + DY+ WQI L RFRSLK+WFV R YG L+ + HV +A FE LV D RFEI VCFR+ S N+ N LL IN+ K ++ L + +RF E HV W ++Q Sbjct: 343 ITDYRHWQIPLGRRFRSLKMWFVFRMYGIKGLQAHIRKHVQLAHEFESLVRQDPRFEICMEVTLGLVCFRLKGS----------------------NQLNETLLKRINSARKIHLVPCHLRDKFVLRFRICSRQVESDHVQQAWQHIRQ 469
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DDC_DROSI (Aromatic-L-amino-acid decarboxylase OS=Drosophila simulans GN=Ddc PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 50/154 (32.47%), Postives = 68/154 (44.16%), Query Frame = -3 Query: 236 DYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQPLEAFQR 697 DY+ WQI L RFR+LKLWFV+R YG NL+ + H N AK F L D RFE+ + VCFR+ S NE N LL IN G ++ A + +Y +R A T+ + W V + ++ Sbjct: 377 DYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGS----------------------NERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ 508
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DDC_DROME (Aromatic-L-amino-acid decarboxylase OS=Drosophila melanogaster GN=Ddc PE=1 SV=4) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 50/154 (32.47%), Postives = 68/154 (44.16%), Query Frame = -3 Query: 236 DYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQPLEAFQR 697 DY+ WQI L RFR+LKLWFV+R YG NL+ + H N AK F L D RFE+ + VCFR+ S NE N LL IN G ++ A + +Y +R A T+ + W V + ++ Sbjct: 377 DYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGS----------------------NERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ 508 The following BLAST results are available for this feature:
BLAST of CF832372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832372 ID=CF832372; Name=CF832372; organism=Citrus sinensis; type=EST; length=711bpback to top |