CF832372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: TYDC5_PAPSO (Tyrosine/DOPA decarboxylase 5 OS=Papaver somniferum GN=TYDC5 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.239e-41 Identity = 88/156 (56.41%), Postives = 109/156 (69.87%), Query Frame = -3 Query: 245 QVVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYV--NCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQPLEA 706 QV+DYKDWQI LS RFRS+KLW V+R+YG ANLR FL SHV MAK F+ L++ DKRFEIV P FA VCFR+ P+ + KL V NC+ + NE N +LL +NA G YMTHAV+GG+Y IRFA G TLTE+RHV + W +Q+ +A Sbjct: 360 QVIDYKDWQIALSRRFRSMKLWLVLRSYGVANLRSFLRSHVKMAKHFDGLIAMDKRFEIVVPNTFAMVCFRLKPAAIFNGKLGENGVDYNCIEE---KTNEINSKLLESVNASGSIYMTHAVVGGVYMIRFAVGATLTEERHVSMAWKVIQEHTDA 512
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: TYDC1_PAPSO (Tyrosine/DOPA decarboxylase 1 OS=Papaver somniferum GN=TYDC1 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.051e-40 Identity = 86/155 (55.48%), Postives = 106/155 (68.39%), Query Frame = -3 Query: 245 QVVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKL-KTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQPLEA 706 QV+DYKDWQI LS RFRS+KLW V+R+YG ANLR FL SHV MAK F+ L+ D RFEIV P FA VCFR+ P+ + K+ + ++ Q NE N +LL +NA GK YMTHAV+GG+Y IRFA G TLTE+RHV W VQ+ +A Sbjct: 360 QVIDYKDWQIALSRRFRSMKLWLVLRSYGIANLRTFLRSHVKMAKHFQGLIGMDNRFEIVVPRTFAMVCFRLKPAAIFRKKIVEDDHIE------AQTNEVNAKLLESVNASGKIYMTHAVVGGVYMIRFAVGATLTEERHVTGAWKVVQEHTDA 508
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: TYDC2_PAPSO (Tyrosine/DOPA decarboxylase 2 OS=Papaver somniferum GN=TYDC2 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.954e-36 Identity = 84/163 (51.53%), Postives = 99/163 (60.74%), Query Frame = -3 Query: 257 QVVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQI-------------NEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQ 706 QVVDYKDWQI LS RFRSLKLW V+R+YG NLR+FL SHV MAK FE L+ D RFEI P FA VCFR+ P K Y N + G + N+ N L +NA G YMTHAV+GG+Y IRFA G TLTE+RHV+ W +Q+ Sbjct: 358 QVVDYKDWQIALSRRFRSLKLWMVLRSYGVTNLRNFLRSHVKMAKTFEGLICMDGRFEITVPRTFAMVCFRLLP-----PKTIKVYDNGVHQNGNGVVPLRDENENLVLANKLNQVYLETVNATGSVYMTHAVVGGVYMIRFAVGSTLTEERHVIYAWKILQE 515
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: TYDC3_PETCR (Tyrosine decarboxylase 3 OS=Petroselinum crispum GN=TYRDC-3 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.583e-35 Identity = 80/162 (49.38%), Postives = 101/162 (62.35%), Query Frame = -3 Query: 224 QVVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQPLEA-FQRAFKP 706 +VVDYKDWQI LS RFR+LKLWFV+R+YG LR F+ HV MAK FE LV DKRFE+V P F+ VCFR+ PS ++ + ++NE N +LL +N G+ Y++H VLGGIY IRFA G TLT+ HV W +Q +A AF P Sbjct: 358 KVVDYKDWQIMLSRRFRALKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVGLDKRFEVVAPRLFSMVCFRIKPSAMIGK-----------NDENEVNEINRKLLESVNDSGRIYVSHTVLGGIYVIRFAIGGTLTDINHVSAAWKVLQDHADALLDDAFLP 508
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: TYDC4_PETCR (Tyrosine decarboxylase 4 OS=Petroselinum crispum GN=TYRDC-4 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.123e-34 Identity = 77/154 (50.00%), Postives = 98/154 (63.64%), Query Frame = -3 Query: 245 QVVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQPLEA 706 +VVDYKDWQI LS RFR+LKLWFV+R+YG LR F+ HV MAK FE LV DKRFE+V P F+ VCFR+ PS ++ + ++NE N +LL +N G+ Y++H VLGGIY IRFA G TLT+ HV W +Q +A Sbjct: 357 KVVDYKDWQIMLSRRFRALKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVGLDKRFEVVAPRLFSMVCFRIKPSAMIGK-----------NDEDEVNEINRKLLESVNDSGRIYVSHTVLGGIYVIRFAIGGTLTDINHVSAAWKVLQDHADA 499
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: TYDC3_PAPSO (Tyrosine/DOPA decarboxylase 3 OS=Papaver somniferum GN=TYDC3 PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.123e-34 Identity = 81/164 (49.39%), Postives = 98/164 (59.76%), Query Frame = -3 Query: 257 QVVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQI--------------NEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQ 706 QVVDYKDWQI L RFRS+KLW V+R+YG NLR+FL SHV MAK FE LV D+RFEI P FA VCFR+ P +K N + G + N+ N L + A G YMTHAV+GG+Y IRFA G TLTE+RHV+ W +Q+ Sbjct: 358 QVVDYKDWQIALIRRFRSMKLWMVLRSYGVTNLRNFLRSHVRMAKTFEGLVGADRRFEITVPRTFAMVCFRLLPPTT----VKVCGENGVHQNGNGVIAVLRNENEELVLANKLNQVYLRQVKATGSVYMTHAVVGGVYMIRFAVGSTLTEERHVIHAWEVLQE 517
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: TYDC2_PETCR (Tyrosine decarboxylase 2 OS=Petroselinum crispum GN=TYRDC-2 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.467e-34 Identity = 76/149 (51.01%), Postives = 97/149 (65.10%), Query Frame = -3 Query: 260 QVVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQ 706 +VVDYKDWQI LS RFR+LKLWFV+R+YG LR F+ HV MAK FE LV+ DKRFE+V P F+ VCFR+ PS ++ + ++NE N +LL +N G+ Y++H VLGGIY IRFA G TLT+ HV W +Q Sbjct: 356 KVVDYKDWQIMLSRRFRALKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVNMDKRFEVVAPRLFSMVCFRIKPSAMIGK-----------NDEDEVNEINRKLLESVNDSGRIYVSHTVLGGIYVIRFAIGGTLTDINHVSAAWKVLQ 493
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: TYDC2_ARATH (Probable tyrosine decarboxylase 2 OS=Arabidopsis thaliana GN=At4g28680 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.678e-30 Identity = 70/156 (44.87%), Postives = 94/156 (60.26%), Query Frame = -3 Query: 236 VVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQPLEAFQR 703 VV+YKDWQI+LS RFRSLKLW V+R YG NLR+F+ HVN+AK FE V+ D FE+V +F+ VCFR++P + Q NE N ELL +N+ GK +++H L G + +RFA G LTE++HV W +Q+ F R Sbjct: 401 VVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAP---------------VDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTR 541
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DDC_CATRO (Aromatic-L-amino-acid decarboxylase OS=Catharanthus roseus GN=TDC PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.794e-28 Identity = 65/150 (43.33%), Postives = 91/150 (60.67%), Query Frame = -3 Query: 257 QVVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQ 706 +VVD+K+WQI +FRSLKLW ++R+YG NL+ + S V M K+FE V D RFEIV P +F+ VCFR+ P V+ L + E N +LL +N+ G+ YMTH ++GGIY +R A G +LTE+ HV W +Q+ Sbjct: 358 KVVDFKNWQIATGRKFRSLKLWLILRSYGVVNLQSHIRSDVAMGKMFEEWVRSDSRFEIVVPRNFSLVCFRLKPD-----------VSSL-----HVEEVNKKLLDMLNSTGRVYMTHTIVGGIYMLRLAVGSSLTEEHHVRRVWDLIQK 491
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: TYDC1_ARATH (Tyrosine decarboxylase 1 OS=Arabidopsis thaliana GN=ELI5 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.329e-27 Identity = 68/149 (45.64%), Postives = 88/149 (59.06%), Query Frame = -3 Query: 257 VVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQ 703 VVDYKDWQI L RFRSLKLW V+R YG L+ ++ +H+ +AK FE+LVS D FEIV P FA VCFR+ P +K + C N N ELL +N+ GK +M+H L G +R A G LTE++HV W +Q+ Sbjct: 349 VVDYKDWQIPLGRRFRSLKLWMVLRLYGSETLKSYIRNHIKLAKEFEQLVSQDPNFEIVTPRIFALVCFRLVP-------VKDEEKKC--------NNRNRELLDAVNSSGKLFMSHTALSGKIVLRCAIGAPLTEEKHVKEAWKIIQE 482 The following BLAST results are available for this feature:
BLAST of CF832372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832372 ID=CF832372; Name=CF832372; organism=Citrus sinensis; type=EST; length=711bpback to top |