CF832372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DDC_PIG (Aromatic-L-amino-acid decarboxylase OS=Sus scrofa GN=DDC PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 48/148 (32.43%), Postives = 67/148 (45.27%), Query Frame = -3 Query: 260 VVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQ 703 + DY+ WQ+ L RFRSLK+WFV R YG L+ ++ HV ++ FE V D RFE+ VCFR+ S L N LL IN+ K ++ L G + +RFA E HV + W ++ Sbjct: 343 ITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSDGL----------------------NEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIR 468
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DCHS_DROME (Histidine decarboxylase OS=Drosophila melanogaster GN=Hdc PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 50/148 (33.78%), Postives = 68/148 (45.95%), Query Frame = -3 Query: 257 VDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQ 700 VD+ WQI LS RFR+LK+WFV+R+YG L+ + V +A+ FE LV D RFE+ H V FR+ NE +LL +N G + + L G Y IRF T T +V W ++Q Sbjct: 343 VDFMHWQIPLSRRFRALKVWFVLRSYGIKGLQRHIREGVRLAQKFEALVLADHRFELPAKRHLGLVVFRIRGD----------------------NEITEKLLKRLNHRGNLHCIPSSLKGQYVIRFTITSTHTTLDDIVKDWMEIRQ 468
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DDC_DROLE (Aromatic-L-amino-acid decarboxylase (Fragment) OS=Drosophila lebanonensis GN=Ddc PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 48/145 (33.10%), Postives = 64/145 (44.14%), Query Frame = -3 Query: 263 DYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGV 697 DY+ WQI + RFR+LKLWFV+R YG NL+ + H A+ F L D RFE+ + VCFR+ S NE N LL IN GK ++ A + +Y +R A T + W V Sbjct: 269 DYRHWQIPIGRRFRALKLWFVLRLYGVENLQAHIRRHCTYAQQFAELCVQDSRFELAAEVNMGLVCFRLKGS----------------------NERNEALLKRINGRGKIHLVPAKIRDVYFLRMAVCSRFTRPEDMEYSWQEV 391
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: L2AM_DROME (Alpha-methyldopa hypersensitive protein OS=Drosophila melanogaster GN=amd PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 48/156 (30.77%), Postives = 66/156 (42.31%), Query Frame = -3 Query: 239 QVVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQPLEAFQ 706 Q+ D++ WQI L RFR+LK+W R G LR+ + H+ +AK FE+LV D RFE+V P VCFR NE +LL + K YM A G +RF T+ + W ++ L Q Sbjct: 342 QIPDFRHWQIPLGRRFRALKVWITFRTLGAEGLRNHVRKHIELAKQFEQLVLKDSRFELVAPRALGLVCFRPKGD----------------------NEITTQLLQRLMDRKKIYMVKAEHAGRQFLRFVVCGMDTKASDIDFAWQEIESQLTDLQ 475
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: L2AM_DROLE (Alpha-methyldopa hypersensitive protein (Fragment) OS=Drosophila lebanonensis GN=amd PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 48/154 (31.17%), Postives = 63/154 (40.91%), Query Frame = -3 Query: 245 QVVDYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQPLEA 706 Q+ D++ WQI L RFR+LK+W R G LR + H+ +AK FE V D RFE+V P VCFR NE +LL + K YM A G +RFA + + WT + L A Sbjct: 271 QIPDFRHWQIPLGRRFRALKVWITFRTLGAEGLRAHVRKHIELAKKFEVFVLADARFELVAPRALGLVCFRAKGE----------------------NEITAQLLQRLMERKKIYMVKAEHRGQLFLRFAVCGMDPKPSDIEFAWTEIGTQLTA 402
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DCHS_MOUSE (Histidine decarboxylase OS=Mus musculus GN=Hdc PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 50/147 (34.01%), Postives = 66/147 (44.90%), Query Frame = -3 Query: 257 DYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQ 697 D+ WQI LS RFRS+KLWFVIR++G NL+ + MAK FE LV D FEI H V FR+ K NCL +L I G+ ++ A + IRF T K ++ W +Q+ Sbjct: 352 DFMHWQIPLSRRFRSIKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRSDPSFEIPAKRHLGLVVFRL------------KGPNCL----------TESVLKEIAKAGQLFLIPATIQDKLIIRFTVTSQFTTKEDILRDWHLIQE 476
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DCHS_RAT (Histidine decarboxylase OS=Rattus norvegicus GN=Hdc PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 49/147 (33.33%), Postives = 67/147 (45.58%), Query Frame = -3 Query: 257 DYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQQ 697 D+ WQI LS RFRS+KLWFVIR++G NL+ + +MAK FE LV D FEI H V FR+ K NCL +L I G+ ++ A + IRF T K ++ W +++ Sbjct: 348 DFMHWQIPLSRRFRSIKLWFVIRSFGVKNLQAHVRHGTDMAKYFESLVRSDPVFEIPAERHLGLVVFRL------------KGPNCL----------TESVLKEIAKTGQVFLIPATIQDKLIIRFTVTSQFTTKDDILRDWNLIRE 472
BLAST of CF832372 vs. ExPASy Swiss-Prot
Match: DCHS_BOVIN (Histidine decarboxylase OS=Bos taurus GN=HDC PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11 Identity = 49/146 (33.56%), Postives = 65/146 (44.52%), Query Frame = -3 Query: 260 DYKDWQITLSGRFRSLKLWFVIRNYGGANLRHFLCSHVNMAKLFERLVSGDKRFEIVFPCHFAGVCFRVSPSPVLMDKLKTKYVNCLFSGGGQINEFNGELLGWINAFGKAYMTHAVLGGIYAIRFAPGVTLTEKRHVVVGWTGVQ 697 D+ WQI LS RFRS+KLWFVIR++G NL+ + MAK FE LV D FEI H V FR+ K NCL +L I G+ ++ A + IRF T + ++ W +Q Sbjct: 345 DFMHWQIPLSRRFRSIKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPFFEIPAKRHLGLVVFRL------------KGPNCL----------TESVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIQ 468 The following BLAST results are available for this feature:
BLAST of CF832372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832372 ID=CF832372; Name=CF832372; organism=Citrus sinensis; type=EST; length=711bpback to top |