CF832740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_BRAJA (Xylose isomerase OS=Bradyrhizobium japonicum GN=xylA PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 4.571e-32 Identity = 62/134 (46.27%), Postives = 85/134 (63.43%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGS 403 +D AT FL +Y L+ D KLNIE NHA L+GHS HH++ A G+ G++D N GD +GWDTDQF ++ E L+ ++ GG GG NFDAK+RR+S D +DL AH+ MD AR AA +++ G+ Sbjct: 246 FDVATCYGFLARYDLLKDVKLNIEQNHAILAGHSFHHEVALAEALGVFGSLDVNRGDDLLGWDTDQFAMNVPELALVFHEILNRGGFTSGGLNFDAKIRRQSIDPDDLIHAHVGSMDACARAFLAAADMLDAGA 379
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_AGRVS (Xylose isomerase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=xylA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.571e-32 Identity = 66/132 (50.00%), Postives = 85/132 (64.39%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIED 397 +D AT FL+ YGL + K+NIE HA L+GH+ H++ A G+ G+ID N D Q GWDTDQF ++ E L V++ GG GG NFD+KLRR+S D DL I HI GMD ARGL+ AAK++ED Sbjct: 244 YDVATVYGFLKTYGLEKEVKVNIEQGHAILAGHTFEHELALANALGIFGSIDMNRNDYQSGWDTDQFPNNVPEMALAYYQVLQAGGFTSGGTNFDSKLRRQSIDPADLLIGHIGGMDCCARGLKAAAKMVED 375
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_LACLS (Xylose isomerase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=xylA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.154e-17 Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATL 229 +DAATA FL+KY L FKLNIE NHA L+GH+ H++ TAR G LG+IDAN G+ +GWDTD+F T + + TL Sbjct: 245 FDAATALAFLQKYDLDKYFKLNIETNHAWLAGHTFEHELNTARTFGALGSIDANQGNYLLGWDTDEFPTLVIDITL 320 The following BLAST results are available for this feature:
BLAST of CF832740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832740 ID=CF832740; Name=CF832740; organism=Citrus sinensis; type=EST; length=405bpback to top |