CF832740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_ARATH (Xylose isomerase OS=Arabidopsis thaliana GN=XYLA PE=2 SV=2) HSP 1 Score: 250.366 bits (638), Expect = 2.172e-66 Identity = 114/134 (85.07%), Postives = 129/134 (96.27%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGS 403 WDAATAANFLRKYGLI++FKLNIECNHATLSGH+CHH++ETAR+NGLLGNIDANTGD Q GWDTDQFLTD+GEAT++M+SVIKNGG+APGGFNFDAKLRRESTDVEDLFIAHI GMDT+ARGLR A K++E+GS Sbjct: 286 WDAATAANFLRKYGLIDEFKLNIECNHATLSGHTCHHELETARINGLLGNIDANTGDAQTGWDTDQFLTDVGEATMVMMSVIKNGGIAPGGFNFDAKLRRESTDVEDLFIAHISGMDTMARGLRNAVKILEEGS 419
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_HORVU (Xylose isomerase OS=Hordeum vulgare GN=XYLA PE=1 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 6.768e-60 Identity = 106/134 (79.10%), Postives = 119/134 (88.81%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGS 403 WD AT +FL+K+GL +FK+N+ECNHATLSGHSCHH++ETAR+N +LGNIDANTGDPQVGWDTD+FLTDI EATLIM SV+KN GLAPGGFNF AKLRRESTDVEDLFIAHI GMDT+ARG R KLIEDGS Sbjct: 288 WDVATTFSFLQKFGLTGEFKINVECNHATLSGHSCHHELETARINDILGNIDANTGDPQVGWDTDEFLTDISEATLIMSSVVKNDGLAPGGFNFYAKLRRESTDVEDLFIAHISGMDTMARGRRNVVKLIEDGS 421
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_BACA2 (Xylose isomerase OS=Bacillus amyloliquefaciens (strain FZB42) GN=xylA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.584e-43 Identity = 80/131 (61.07%), Postives = 101/131 (77.10%), Query Frame = 2 Query: 5 DAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIED 397 DAAT FL++YGL N FKLN+E NHATL+GH+ H++ AR++GLLG++DAN GDP +GWDTD+F TD+ ATL M ++KNGGL GG NFDAK+RR S + +DL AH+ GMDT ARGL+ A KLIED Sbjct: 252 DAATTIAFLKQYGLDNHFKLNLEANHATLAGHTFEHELRMARVHGLLGSVDANQGDPLLGWDTDEFPTDLYSATLAMYEILKNGGLGSGGLNFDAKVRRSSFEPDDLLYAHVAGMDTFARGLKAARKLIED 382
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_LISW6 (Xylose isomerase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=xylA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 5.756e-43 Identity = 81/132 (61.36%), Postives = 102/132 (77.27%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIED 397 +DAAT FL+KYGL NDFKLN+E NHATL+GH+ H++ AR LG+IDAN GD +GWDTD+F T+I + TL M +++NGG+APGG NFDAK+RR S ++EDL +AHI GMDT ARGL+ AAKL ED Sbjct: 243 FDAATTMAFLQKYGLENDFKLNLEANHATLAGHTFEHELNVARTYNALGSIDANQGDLLLGWDTDEFPTNIYDTTLTMYEILQNGGIAPGGINFDAKVRRTSFEMEDLLLAHIAGMDTYARGLKAAAKLTED 374
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_XANOM (Xylose isomerase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=xylA1 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.086e-41 Identity = 82/130 (63.08%), Postives = 99/130 (76.15%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLI 391 +D+AT FLR++GL DFKLNIE NHATLSGHS HD++ A GLLG+IDAN G+PQ GWDTDQF TD+ + ML V++ GGLAPGG NFDAK+RRES+D +DLF+AHI GMD ARGL A L+ Sbjct: 253 FDSATVIGFLRQHGLDQDFKLNIEANHATLSGHSFEHDLQVASDAGLLGSIDANRGNPQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALL 382
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_XANC5 (Xylose isomerase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=xylA1 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.086e-41 Identity = 82/130 (63.08%), Postives = 99/130 (76.15%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLI 391 +D+AT FLR++GL DFKLNIE NHATLSGHS HD++ A GLLG+IDAN G+PQ GWDTDQF TD+ + ML V++ GGLAPGG NFDAK+RRES+D +DLF+AHI GMD ARGL A L+ Sbjct: 253 FDSATVIGFLRQHGLDQDFKLNIEANHATLSGHSFEHDLQVASDAGLLGSIDANRGNPQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALL 382
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA2_XANOR (Xylose isomerase 2 OS=Xanthomonas oryzae pv. oryzae GN=xylA2 PE=3 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 1.086e-41 Identity = 82/130 (63.08%), Postives = 99/130 (76.15%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLI 391 +D+AT FLR++GL DFKLNIE NHATLSGHS HD++ A GLLG+IDAN G+PQ GWDTDQF TD+ + ML V++ GGLAPGG NFDAK+RRES+D +DLF+AHI GMD ARGL A L+ Sbjct: 253 FDSATVIGFLRQHGLDQDFKLNIEANHATLSGHSFEHDLQVASDAGLLGSIDANRGNPQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALL 382
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA2_XANCP (Xylose isomerase 2 OS=Xanthomonas campestris pv. campestris GN=xylA2 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.086e-41 Identity = 82/130 (63.08%), Postives = 99/130 (76.15%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLI 391 +D+AT FLR++GL DFKLNIE NHATLSGHS HD++ A GLLG+IDAN G+PQ GWDTDQF TD+ + ML V++ GGLAPGG NFDAK+RRES+D +DLF+AHI GMD ARGL A L+ Sbjct: 253 FDSATVIGFLRQHGLDQDFKLNIEANHATLSGHSFEHDLQVASDAGLLGSIDANRGNPQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVADALL 382
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA2_XANC8 (Xylose isomerase 2 OS=Xanthomonas campestris pv. campestris (strain 8004) GN=xylA2 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.086e-41 Identity = 82/130 (63.08%), Postives = 99/130 (76.15%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLI 391 +D+AT FLR++GL DFKLNIE NHATLSGHS HD++ A GLLG+IDAN G+PQ GWDTDQF TD+ + ML V++ GGLAPGG NFDAK+RRES+D +DLF+AHI GMD ARGL A L+ Sbjct: 253 FDSATVIGFLRQHGLDQDFKLNIEANHATLSGHSFEHDLQVASDAGLLGSIDANRGNPQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVADALL 382
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA2_XANAC (Xylose isomerase 2 OS=Xanthomonas axonopodis pv. citri GN=xylA2 PE=3 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 1.086e-41 Identity = 82/130 (63.08%), Postives = 99/130 (76.15%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLI 391 +D+AT FLR++GL DFKLNIE NHATLSGHS HD++ A GLLG+IDAN G+PQ GWDTDQF TD+ + ML V++ GGLAPGG NFDAK+RRES+D +DLF+AHI GMD ARGL A L+ Sbjct: 253 FDSATVIGFLRQHGLDQDFKLNIEANHATLSGHSFEHDLQVASDAGLLGSIDANRGNPQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALL 382 The following BLAST results are available for this feature:
BLAST of CF832740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832740 ID=CF832740; Name=CF832740; organism=Citrus sinensis; type=EST; length=405bpback to top |