CF832740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_SALNS (Xylose isomerase OS=Salmonella newport (strain SL254) GN=xylA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.503e-38 Identity = 72/133 (54.14%), Postives = 95/133 (71.43%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D AT FL+++GL + K+NIE NHATL+GHS HH+I TA G+ G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG Sbjct: 245 YDVATVYGFLKQFGLEKEIKVNIEANHATLAGHSFHHEIATAIALGIFGSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDG 377
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_SALHS (Xylose isomerase OS=Salmonella heidelberg (strain SL476) GN=xylA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.503e-38 Identity = 72/133 (54.14%), Postives = 95/133 (71.43%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D AT FL+++GL + K+NIE NHATL+GHS HH+I TA G+ G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG Sbjct: 245 YDVATVYGFLKQFGLEKEIKVNIEANHATLAGHSFHHEIATAIALGIFGSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDG 377
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_SALG2 (Xylose isomerase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=xylA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.503e-38 Identity = 72/133 (54.14%), Postives = 95/133 (71.43%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D AT FL+++GL + K+NIE NHATL+GHS HH+I TA G+ G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG Sbjct: 245 YDVATVYGFLKQFGLEKEIKVNIEANHATLAGHSFHHEIATAIALGIFGSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDG 377
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_SALEP (Xylose isomerase OS=Salmonella enteritidis PT4 (strain P125109) GN=xylA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.503e-38 Identity = 72/133 (54.14%), Postives = 95/133 (71.43%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D AT FL+++GL + K+NIE NHATL+GHS HH+I TA G+ G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG Sbjct: 245 YDVATVYGFLKQFGLEKEIKVNIEANHATLAGHSFHHEIATAIALGIFGSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDG 377
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_SALDC (Xylose isomerase OS=Salmonella dublin (strain CT_02021853) GN=xylA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.503e-38 Identity = 72/133 (54.14%), Postives = 95/133 (71.43%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D AT FL+++GL + K+NIE NHATL+GHS HH+I TA G+ G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG Sbjct: 245 YDVATVYGFLKQFGLEKEIKVNIEANHATLAGHSFHHEIATAIALGIFGSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDG 377
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_SALCH (Xylose isomerase OS=Salmonella choleraesuis GN=xylA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.503e-38 Identity = 72/133 (54.14%), Postives = 95/133 (71.43%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D AT FL+++GL + K+NIE NHATL+GHS HH+I TA G+ G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG Sbjct: 245 YDVATVYGFLKQFGLEKEIKVNIEANHATLAGHSFHHEIATAIALGIFGSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDG 377
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_SALA4 (Xylose isomerase OS=Salmonella agona (strain SL483) GN=xylA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.503e-38 Identity = 72/133 (54.14%), Postives = 95/133 (71.43%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D AT FL+++GL + K+NIE NHATL+GHS HH+I TA G+ G++DAN GD Q+GWDTDQF + E L+M ++K GG GG NFDAK+RR+STD DLF HI MDT+A L+ AA+++EDG Sbjct: 245 YDVATVYGFLKQFGLEKEIKVNIEANHATLAGHSFHHEIATAIALGIFGSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDG 377
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_BACSK (Xylose isomerase OS=Bacillus clausii (strain KSM-K16) GN=xylA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.503e-38 Identity = 72/132 (54.55%), Postives = 97/132 (73.48%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIED 397 +D AT FL+ YGL + FK NIE NHATL+GH+ H++ AR++ +LG++DAN GDP +GWDTD+F TD+ TL M +++NGGL GG NFDAK+RR S + +DLF AHI GMD+ A GL+ A +LI+D Sbjct: 243 FDVATGYAFLQHYGLQDSFKFNIEANHATLAGHTFEHELRYARIHHMLGSVDANQGDPLLGWDTDEFPTDLYSTTLAMYEILQNGGLGRGGLNFDAKVRRGSFEADDLFFAHIAGMDSFAIGLKVAQQLIDD 374
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_THENN (Xylose isomerase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=xylA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.269e-38 Identity = 77/133 (57.89%), Postives = 94/133 (70.68%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D ATA FL+ +GL FK NIE NHATL+GH+ H++ AR+ G LG+IDAN GD +GWDTDQF T++ + TL M VIK GG GG NFDAK+RR S VEDLFI HI GMDT A G + A KL++DG Sbjct: 245 FDVATAYAFLKSHGLDEYFKFNIEANHATLAGHTFQHELRMARILGKLGSIDANQGDLLLGWDTDQFPTNVYDTTLAMYEVIKAGGFTKGGLNFDAKVRRASYKVEDLFIGHIAGMDTFALGFKVAYKLVKDG 377
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_THENE (Xylose isomerase OS=Thermotoga neapolitana GN=xylA PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.269e-38 Identity = 77/133 (57.89%), Postives = 94/133 (70.68%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D ATA FL+ +GL FK NIE NHATL+GH+ H++ AR+ G LG+IDAN GD +GWDTDQF T++ + TL M VIK GG GG NFDAK+RR S VEDLFI HI GMDT A G + A KL++DG Sbjct: 245 FDVATAYAFLKSHGLDEYFKFNIEANHATLAGHTFQHELRMARILGKLGSIDANQGDLLLGWDTDQFPTNVYDTTLAMYEVIKAGGFTKGGLNFDAKVRRASYKVEDLFIGHIAGMDTFALGFKVAYKLVKDG 377 The following BLAST results are available for this feature:
BLAST of CF832740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832740 ID=CF832740; Name=CF832740; organism=Citrus sinensis; type=EST; length=405bpback to top |