CF832740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_RUMFL (Xylose isomerase OS=Ruminococcus flavefaciens GN=xylA PE=3 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 3.269e-38 Identity = 77/133 (57.89%), Postives = 92/133 (69.17%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D AT FLRKYGL DFK+NIE NHATL+ H+ H++ AR NG+ G+IDAN GD +GWDTDQF T+I + T+ M VIK GG GG NFDAK RR S ED+F ++I GMD A G R A KLIEDG Sbjct: 242 FDTATVLGFLRKYGLDKDFKMNIEANHATLAQHTFQHELRVARDNGVFGSIDANQGDVLLGWDTDQFPTNIYDTTMCMYEVIKAGGFTNGGLNFDAKARRGSFTPEDIFYSYIAGMDAFALGFRAALKLIEDG 374
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_ANATD (Xylose isomerase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=xylA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.269e-38 Identity = 76/133 (57.14%), Postives = 94/133 (70.68%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D+A FL+KY L FKLNIE NHATL+GH HH++ AR+N +LG+IDAN GD +GWDTDQF TD+ TL M VIK GG GG NFDAK+RR S ++EDL I HI GMD A+G + A KL++DG Sbjct: 244 FDSAHVYGFLKKYDLDKYFKLNIEVNHATLAGHDFHHELRFARINNMLGSIDANMGDLLLGWDTDQFPTDVRLTTLAMYEVIKAGGFDKGGLNFDAKVRRGSFELEDLVIGHIAGMDAFAKGFKIAYKLVKDG 376
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_MARMS (Xylose isomerase OS=Marinomonas sp. (strain MWYL1) GN=xylA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 4.269e-38 Identity = 73/132 (55.30%), Postives = 95/132 (71.97%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIED 397 +D AT FL+++GL + K+NIE NHATL+GHS HH+I TA G+LG++DAN GD Q+GWDTDQF T + E TL+ ++K+GG GG+ FD KLRR+S D+EDLF HI MDT+A L A K+IED Sbjct: 245 YDTATVYGFLKEFGLEKEIKVNIEANHATLAGHSFHHEIATACSLGILGSVDANQGDAQLGWDTDQFPTSVEEYTLVTYEILKSGGFKTGGYMFDTKLRRQSMDLEDLFHGHIGAMDTLALSLERAVKMIED 376
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_THEP1 (Xylose isomerase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=xylA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.575e-38 Identity = 78/132 (59.09%), Postives = 94/132 (71.21%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIED 397 +D ATA FL+ +GL FK NIE NHATL+GH+ H++ AR+ G LG+IDAN GD +GWDTDQF T+I + TL M VIK GG GG NFDAK+RR S VEDLFI HIVGMDT A G + A KL++D Sbjct: 245 FDVATAYAFLKNHGLDEYFKFNIEANHATLAGHTFQHELRMARILGKLGSIDANQGDLLLGWDTDQFPTNIYDTTLAMYEVIKAGGFTKGGLNFDAKVRRASYKVEDLFIGHIVGMDTFALGFKIAYKLVKD 376
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_PHOLL (Xylose isomerase OS=Photorhabdus luminescens subsp. laumondii GN=xylA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 7.282e-38 Identity = 70/133 (52.63%), Postives = 97/133 (72.93%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D AT FL+++GL N+ K+NIE NHATL+GHS H++ TA G+LG+IDAN GD Q+GWDTDQF + E +L+M ++K GG GG NFDAK+RR+S D++DLF HI +DT+A L++A K++ DG Sbjct: 245 YDVATVYGFLKQFGLENEIKVNIEANHATLAGHSFQHEVATAIALGILGSIDANRGDAQLGWDTDQFPNSVEENSLVMYEILKAGGFTTGGLNFDAKVRRQSIDIDDLFYGHIGAIDTMALSLKSAVKILVDG 377
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_THETU (Xylose isomerase OS=Thermoanaerobacter thermosulfurogenes GN=xylA PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.510e-38 Identity = 76/132 (57.58%), Postives = 92/132 (69.70%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIED 397 +D A FLRKY L FK+NIE NHATL+ H H++ AR+NG+LG+IDANTGD +GWDTDQF TDI TL M VIK GG GG NFDAK+RR S + EDLF+ HI GMD A+G + A KL++D Sbjct: 245 FDVANVLAFLRKYDLDKYFKVNIEANHATLAFHDFQHELRYARINGVLGSIDANTGDMLLGWDTDQFPTDIRMTTLAMYEVIKMGGFDKGGLNFDAKVRRASFEPEDLFLGHIAGMDAFAKGFKVAYKLVKD 376
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_THESQ (Xylose isomerase OS=Thermotoga sp. (strain RQ2) GN=xylA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.510e-38 Identity = 78/133 (58.65%), Postives = 93/133 (69.92%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D ATA FL+ +GL FK NIE NHATL+GH+ H++ AR+ G LG+IDAN GD +GWDTDQF T+I + TL M VIK GG GG NFDAK+RR S VEDLFI HI GMDT A G + A KL +DG Sbjct: 245 FDVATAYAFLKNHGLDEYFKFNIEANHATLAGHTFQHELRMARILGKLGSIDANQGDLLLGWDTDQFPTNIYDTTLAMYEVIKAGGFTKGGLNFDAKVRRASYKVEDLFIGHIAGMDTFALGFKIAYKLAKDG 377
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_THEMA (Xylose isomerase OS=Thermotoga maritima GN=xylA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.510e-38 Identity = 78/133 (58.65%), Postives = 93/133 (69.92%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D ATA FL+ +GL FK NIE NHATL+GH+ H++ AR+ G LG+IDAN GD +GWDTDQF T+I + TL M VIK GG GG NFDAK+RR S VEDLFI HI GMDT A G + A KL +DG Sbjct: 245 FDVATAYAFLKNHGLDEYFKFNIEANHATLAGHTFQHELRMARILGKLGSIDANQGDLLLGWDTDQFPTNIYDTTLAMYEVIKAGGFTKGGLNFDAKVRRASYKVEDLFIGHIAGMDTFALGFKIAYKLAKDG 377
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_NOVAD (Xylose isomerase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=xylA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.242e-37 Identity = 75/133 (56.39%), Postives = 94/133 (70.68%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDG 400 +D T FL+++GL ++ K+NIE NHATLSGH+ H++ AR G+LG+IDAN GD Q GWDTDQF + E TL ML +I+ GG GGFNFDAK+RR+S D DLF HI G+DT+A L AA LIEDG Sbjct: 246 FDTQTVFGFLKRFGLESEVKVNIEANHATLSGHTFEHELAMARALGILGSIDANRGDHQNGWDTDQFPNSVEELTLAMLELIRAGGFTDGGFNFDAKVRRQSIDAADLFHGHIGGIDTIAHALVKAAALIEDG 378
BLAST of CF832740 vs. ExPASy Swiss-Prot
Match: XYLA_ACTPJ (Xylose isomerase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=xylA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.622e-37 Identity = 72/132 (54.55%), Postives = 94/132 (71.21%), Query Frame = 2 Query: 2 WDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIED 397 +D AT FL+++GL + K+NIE NHATL+GH+ H+I TA + G+IDAN GDPQ+GWDTDQF + E TL+M ++K GG GGFNFDAK+RR+STD DLF HI +D +A L+ AAK+IED Sbjct: 245 YDVATVYGFLKQFGLEKEIKVNIEANHATLAGHTFQHEIATAAALDIFGSIDANRGDPQLGWDTDQFPNSVEENTLVMYEILKAGGFTTGGFNFDAKIRRQSTDPYDLFHGHIGAIDVLALSLKRAAKMIED 376 The following BLAST results are available for this feature:
BLAST of CF832740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832740 ID=CF832740; Name=CF832740; organism=Citrus sinensis; type=EST; length=405bpback to top |