CF832770
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832770 vs. ExPASy Swiss-Prot
Match: RS25_SOLLC (40S ribosomal protein S25 OS=Solanum lycopersicum GN=RPS25 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.773e-30 Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = -2 Query: 146 VNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATNT 361 VNNMVLFD++TYDKLLSEAPKYKLITPS+LSDRLRI+GSLARKAIR+LMARG IRMVSAHASQQIYTRATNT Sbjct: 37 VNNMVLFDKSTYDKLLSEAPKYKLITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108
BLAST of CF832770 vs. ExPASy Swiss-Prot
Match: RS252_ARATH (40S ribosomal protein S25-2 OS=Arabidopsis thaliana GN=RPS25B PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.773e-30 Identity = 65/72 (90.28%), Postives = 71/72 (98.61%), Query Frame = -2 Query: 146 VNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATNT 361 VNNMVLFDQ TYDKLL+EAPK+KLITPSILSDR+RINGSLAR+AIRELMA+GLIRMVSAH+SQQIYTRATNT Sbjct: 37 VNNMVLFDQGTYDKLLTEAPKFKLITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108
BLAST of CF832770 vs. ExPASy Swiss-Prot
Match: RS254_ARATH (40S ribosomal protein S25-4 OS=Arabidopsis thaliana GN=RPS25E PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 4.730e-30 Identity = 64/72 (88.89%), Postives = 72/72 (100.00%), Query Frame = -2 Query: 146 VNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATNT 361 VNNMVLFDQATYDKLL+EAPK+KLITPSILSDR+RINGSLAR+AIRELMA+G+IRMV+AH+SQQIYTRATNT Sbjct: 37 VNNMVLFDQATYDKLLTEAPKFKLITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108
BLAST of CF832770 vs. ExPASy Swiss-Prot
Match: RS253_ARATH (40S ribosomal protein S25-3 OS=Arabidopsis thaliana GN=RPS25D PE=3 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 1.376e-29 Identity = 65/71 (91.55%), Postives = 70/71 (98.59%), Query Frame = -2 Query: 149 VNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATN 361 VNNMVLFDQATYDKLLSEAPK+KLITPSILSDRLRINGSLAR+AIRELMA+G IRMVSAH+SQQIYTRAT+ Sbjct: 37 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107
BLAST of CF832770 vs. ExPASy Swiss-Prot
Match: RS251_ARATH (40S ribosomal protein S25-1 OS=Arabidopsis thaliana GN=RPS25A PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 2.870e-27 Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = -2 Query: 152 VNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 361 VNNMVLFDQATYDKL+SEAPK+KLITPSILSDRLRINGSLARKAIR+LM +G IRMVS H+SQQI TRAT Sbjct: 36 VNNMVLFDQATYDKLMSEAPKFKLITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 105
BLAST of CF832770 vs. ExPASy Swiss-Prot
Match: RS25_AMACR (40S ribosomal protein S25 OS=Amaranthus cruentus GN=RPS25 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 8.941e-21 Identity = 49/71 (69.01%), Postives = 61/71 (85.92%), Query Frame = -2 Query: 149 VNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATN 361 VNN+VLFD AT+DKLLSEA K K++T + LS+R RINGSLAR+AIREL++RG I+MV H+S QIYTR+TN Sbjct: 36 VNNLVLFDNATFDKLLSEAGKQKVVTAATLSERFRINGSLARRAIRELVSRGAIKMVCHHSSLQIYTRSTN 106
BLAST of CF832770 vs. ExPASy Swiss-Prot
Match: RS25_BRABE (40S ribosomal protein S25 OS=Branchiostoma belcheri GN=RPS25 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.525e-20 Identity = 45/70 (64.29%), Postives = 61/70 (87.14%), Query Frame = -2 Query: 152 VNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 361 +NN+VLFD+ATYDKL E P YKLITPS++S+RL+I GSLAR A++EL ++G+I++VS H++Q IYTRAT Sbjct: 40 LNNLVLFDKATYDKLYKEVPSYKLITPSVVSERLKIRGSLARAALKELHSKGMIKLVSKHSAQVIYTRAT 109
BLAST of CF832770 vs. ExPASy Swiss-Prot
Match: RS25_SHEEP (40S ribosomal protein S25 OS=Ovis aries GN=RPS25 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.569e-20 Identity = 44/70 (62.86%), Postives = 60/70 (85.71%), Query Frame = -2 Query: 152 VNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 361 +NN+VLFD+ATYDKL E P YKLITP+++S+RL+I GSLAR A++EL+++GLI++VS H +Q IYTR T Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
BLAST of CF832770 vs. ExPASy Swiss-Prot
Match: RS25_RAT (40S ribosomal protein S25 OS=Rattus norvegicus GN=Rps25 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.569e-20 Identity = 44/70 (62.86%), Postives = 60/70 (85.71%), Query Frame = -2 Query: 152 VNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 361 +NN+VLFD+ATYDKL E P YKLITP+++S+RL+I GSLAR A++EL+++GLI++VS H +Q IYTR T Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
BLAST of CF832770 vs. ExPASy Swiss-Prot
Match: RS25_MOUSE (40S ribosomal protein S25 OS=Mus musculus GN=Rps25 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.569e-20 Identity = 44/70 (62.86%), Postives = 60/70 (85.71%), Query Frame = -2 Query: 152 VNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 361 +NN+VLFD+ATYDKL E P YKLITP+++S+RL+I GSLAR A++EL+++GLI++VS H +Q IYTR T Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113 The following BLAST results are available for this feature:
BLAST of CF832770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832770 ID=CF832770; Name=CF832770; organism=Citrus sinensis; type=EST; length=539bpback to top |