CF832911

Overview
NameCF832911
Unique NameCF832911
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAAW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain MW2) GN=gatA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 2 
Query:  341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658
            A  IGK  +DEFA   +    ++    NP     +P              LV FSLG DT G +R P+A+CG++G +P+YG VS  G++  ++SLD +G   R+ K
Sbjct:  116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
[Close]
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAAT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=gatA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 2 
Query:  341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658
            A  IGK  +DEFA   +    ++    NP     +P              LV FSLG DT G +R P+A+CG++G +P+YG VS  G++  ++SLD +G   R+ K
Sbjct:  116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
[Close]
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAAS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain MSSA476) GN=gatA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 2 
Query:  341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658
            A  IGK  +DEFA   +    ++    NP     +P              LV FSLG DT G +R P+A+CG++G +P+YG VS  G++  ++SLD +G   R+ K
Sbjct:  116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
[Close]
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAAR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain MRSA252) GN=gatA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 2 
Query:  341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658
            A  IGK  +DEFA   +    ++    NP     +P              LV FSLG DT G +R P+A+CG++G +P+YG VS  G++  ++SLD +G   R+ K
Sbjct:  116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
[Close]
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAAE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain Newman) GN=gatA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 2 
Query:  341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658
            A  IGK  +DEFA   +    ++    NP     +P              LV FSLG DT G +R P+A+CG++G +P+YG VS  G++  ++SLD +G   R+ K
Sbjct:  116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
[Close]
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain COL) GN=gatA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 2 
Query:  341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658
            A  IGK  +DEFA   +    ++    NP     +P              LV FSLG DT G +R P+A+CG++G +P+YG VS  G++  ++SLD +G   R+ K
Sbjct:  116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
[Close]
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAAB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=gatA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 2 
Query:  341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658
            A  IGK  +DEFA   +    ++    NP     +P              LV FSLG DT G +R P+A+CG++G +P+YG VS  G++  ++SLD +G   R+ K
Sbjct:  116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
[Close]
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAA9 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain JH9) GN=gatA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 2 
Query:  341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658
            A  IGK  +DEFA   +    ++    NP     +P              LV FSLG DT G +R P+A+CG++G +P+YG VS  G++  ++SLD +G   R+ K
Sbjct:  116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
[Close]
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAA8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain NCTC 8325) GN=gatA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 2 
Query:  341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658
            A  IGK  +DEFA   +    ++    NP     +P              LV FSLG DT G +R P+A+CG++G +P+YG VS  G++  ++SLD +G   R+ K
Sbjct:  116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
[Close]
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAA3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain USA300) GN=gatA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 2 
Query:  341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658
            A  IGK  +DEFA   +    ++    NP     +P              LV FSLG DT G +R P+A+CG++G +P+YG VS  G++  ++SLD +G   R+ K
Sbjct:  116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
The following BLAST results are available for this feature:
BLAST of CF832911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 335
Match NameE-valueIdentityDescription
GATA_STAAW2.621e-1335.85Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_STAAT2.621e-1335.85Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_STAAS2.621e-1335.85Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_STAAR2.621e-1335.85Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_STAAE2.621e-1335.85Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_STAAC2.621e-1335.85Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_STAAB2.621e-1335.85Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_STAA92.621e-1335.85Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_STAA82.621e-1335.85Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_STAA32.621e-1335.85Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02K12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02K12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832911 ID=CF832911; Name=CF832911; organism=Citrus sinensis; type=EST; length=743bp
CAAATTAAGAATCATATCGAGTTCCTATATGGCTTCTCAATCTGCTAATT
TATGGGTATTGTTGGGTCTGGGTTTAGCTGGAATTCTGCTAATGACTAAA
AAGCTTAAGAAGAATATAAAACAAGATTTTGGAGCGTTCATCGAGAAACT
TCAACTGCTTCCTCCGCCTCAGCCCCTTCCTCCAAAAGCCCCTCATCCTC
TTACCGGCCTCTCTTTTGCCGTCTCTGACCTATTCGATATCGAAGGATAC
GTGACTGGTTTTGGGCATCCAGAGTGGGCCCGGACGCACAGTGCAGCTTC
TCGAACGTCTACTGTGGTTTCCACCCTCGTCGAAGGAGGTGCCACTTGCA
TTGGCAAAACTGTGGTTGATGAATTTGCCTACAGTATAAATGGAACAAAT
AAGCATTATGATACGCCTACTAATCCTGCTGCACCTTCACAAATGCCGGG
TGGATCTTCTAGTGGGGCTGCTGTGGCCGTTGCTGCTGATCTTGTTGATT
TCTCCTTGGGTATTGATACTGTTGGAGGTGTGAGGGTACCTTCTGCATTT
TGTGGAATTTTAGGGTTCCGGCCCTCCTATGGGGCTGTTTCCCACATGGG
GATTATACCCATTTCAACAAGTCTTGATACTGTTGGTTGGTTTGCTAGGG
ATCCTAAAATTCTGCGTCATGTTGGCCATGTGTTGCTGCAACTTCCATTT
GCAGCTCAACGTAGTCCAAGACAAATTATAATTGCTGATGATT
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