CF832911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_HELMI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=gatA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.705e-17 Identity = 46/116 (39.66%), Postives = 63/116 (54.31%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV 673 L E GA +GKT +DEFA + N + NP ++P FSLG DT G +R P+AFCG++G +P+YGAVS G+I ++SLD +G F RD + HV Sbjct: 111 LKEAGAVMMGKTNLDEFAMGSSTENSGFFATCNPWDIERVPGGSSGGSAASVAAGQAVFSLGSDTGGSIRQPAAFCGVVGLKPTYGAVSRFGLIAFASSLDQIGPFTRDVRDCAHV 226
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_LEGPC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella pneumophila (strain Corby) GN=gatA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.533e-16 Identity = 43/118 (36.44%), Postives = 66/118 (55.93%), Query Frame = 2 Query: 332 EGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 + GA IGKT +DEFA + N ++ + NP ++P +LV F++G DT G +R P+AFCGI G +P+YG VS G++ ++SLD G FA+ + L + H + Sbjct: 109 QNGAIIIGKTNMDEFAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCI 226
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_LEGPA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella pneumophila (strain Paris) GN=gatA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.533e-16 Identity = 43/118 (36.44%), Postives = 66/118 (55.93%), Query Frame = 2 Query: 332 EGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 + GA IGKT +DEFA + N ++ + NP ++P +LV F++G DT G +R P+AFCGI G +P+YG VS G++ ++SLD G FA+ + L + H + Sbjct: 109 QNGAIIIGKTNMDEFAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCI 226
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_LEGPL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella pneumophila (strain Lens) GN=gatA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.308e-16 Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 2 Query: 332 EGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 + GA IGKT +DEFA + N ++ + NP ++P LV F++G DT G +R P+AFCGI G +P+YG VS G++ ++SLD G FA+ + L + H + Sbjct: 109 QNGAIIIGKTNMDEFAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGSLVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCI 226
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_SYNP6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gatA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.320e-16 Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 L E GA +GKT +DEFA + N Y T NP +++P D +LG DT G +R P+AFCG++G +P+YG VS G++ ++SLD +G F+R Sbjct: 107 LAEAGAVAVGKTNLDEFAVGSSTENSAYQTTANPWDLTRVPGGSSGGSAAAVAADECVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFSR 214
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_SYNE7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus elongatus (strain PCC 7942) GN=gatA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.320e-16 Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 L E GA +GKT +DEFA + N Y T NP +++P D +LG DT G +R P+AFCG++G +P+YG VS G++ ++SLD +G F+R Sbjct: 107 LAEAGAVAVGKTNLDEFAMGSSTENSAYQTTANPWDLTRVPGGSSGGSAAAVAADECVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFSR 214
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_METHJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=gatA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.320e-16 Identity = 44/120 (36.67%), Postives = 63/120 (52.50%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 L GA +GKT +DEF N Y NP ++P LVD ++G DT G +R P+AFCGI+G +P+YG VS G+I + SL+ +G ARD + L ++ V+ Sbjct: 69 LKNAGAAIVGKTNMDEFGMGTTTENSAYGPTLNPLDHQRVPGGSSGGSAAAVAAGLVDCAIGSDTGGSIRCPAAFCGIVGLKPTYGRVSRFGLIAYANSLEQIGPMARDVQTLSNLYSVI 188
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_SYNFM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=gatA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.625e-16 Identity = 48/149 (32.21%), Postives = 71/149 (47.65%), Query Frame = 2 Query: 206 GLSFAVSDLFDIEGYVTGFGHPEWXXXXXXXXXXXXXXXXLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 G+ A+ D+ ++G VT G L E GA +GKT +DEFA + N Y NP ++P DL SLG DT G +R P++FCG++G +P+YG VS G++ ++SLD +G +D Sbjct: 72 GIPLAIKDVLCMQGTVTTCGSR--ILENFVPPYDGTVIARLREAGAIFLGKTNMDEFAMGSSTENSAYGVTRNPWDRERVPGGSSGGSAAAVAADLCSGSLGTDTGGSIRQPASFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITKD 218
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATH_YEAST (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial OS=Saccharomyces cerevisiae GN=HER2 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.642e-15 Identity = 47/123 (38.21%), Postives = 64/123 (52.03%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQ---MPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 L + G +GKT +DEF G + NP P + + DLVDF+LG DT G VR+P+ + +LGF+PSYG +S G+I S SLDTVG ++ +LR V H L Sbjct: 84 LKQAGVHILGKTNLDEFGMGSGGVHSIRGPVINPLYPHEDKKIMGGSSSGAAASVACDLVDFALGTDTGGSVRLPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTL 206
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_PSYWF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Psychrobacter sp. (strain PRwf-1) GN=gatA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.642e-15 Identity = 49/148 (33.11%), Postives = 69/148 (46.62%), Query Frame = 2 Query: 206 GLSFAVSDLFDIEGYVTGFGHPEWXXXXXXXXXXXXXXXXLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 GL A DLF +G +T G + E GA C+GK +DEFA + + +Y NP S++P V F+ G DT G +R P++FCG+ G +P+YG VS G+I ++SLD G F R Sbjct: 73 GLPMAHKDLFCTKGLLTTSGSK--ILHNFVSPYDATIVSNIREAGAVCLGKLNMDEFAMGSDNESSYYGAVHNPWDLSRVPGGSSGGSAAAVAAGFVPFATGSDTGGSIRQPASFCGLTGIKPTYGRVSRFGMIAYASSLDQAGTFGR 218 The following BLAST results are available for this feature:
BLAST of CF832911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 335
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832911 ID=CF832911; Name=CF832911; organism=Citrus sinensis; type=EST; length=743bpback to top |