CF832911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAA2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain JH1) GN=gatA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 2 Query: 341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 A IGK +DEFA + ++ NP +P LV FSLG DT G +R P+A+CG++G +P+YG VS G++ ++SLD +G R+ K Sbjct: 116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_PARUW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Protochlamydia amoebophila (strain UWE25) GN=gatA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 40/104 (38.46%), Postives = 55/104 (52.88%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 637 L+ GA IGKT +DEFA + N +NP P L SLG DT G VR+P++FCG++GF+P+YG VS G++ +SLD +G Sbjct: 109 LLAEGAVIIGKTNMDEFAMGSSTENSALQKTSNPWNLKCTPGGSSGGSAAAVAGRLSPLSLGSDTGGSVRLPASFCGVVGFKPTYGRVSRFGLVAYGSSLDQIG 212
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_GLOVI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Gloeobacter violaceus GN=gatA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK----ILRHV-GHVLLQLPFAAQRSP--RQIIIAD 739 L E GA IGKT +DEFA + N + NP ++P SLG DT G +R P++FCG++G +P+YG VS G+I ++SLD +G F R + +L+ + GH L A P RQ +I+D Sbjct: 107 LEEQGALIIGKTNLDEFAMGSSTENSAFGPTRNPWDLGRVPGGSSGGSAAAVAACEAVASLGSDTGGSIRQPASFCGVVGLKPTYGLVSRYGLIAFASSLDQIGPFTRTVEDAALVLQAIAGHDPLDSTSLAVNVPDYRQALISD 251
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_DESRM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfotomaculum reducens (strain MI-1) GN=gatA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 39/112 (34.82%), Postives = 60/112 (53.57%), Query Frame = 2 Query: 350 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 +GKT +DEFA + N + NP ++P SLG DT G +R P+A CG++G +P+YG+VS G++ ++SLD +G F RD + HV +V+ Sbjct: 119 VGKTNMDEFAMGSSTENSGFHLTHNPWDLDRVPGGSSGGSAAAVAAGEAIISLGSDTGGSIRQPAALCGVVGMKPTYGSVSRYGLVAYASSLDQIGPFTRDVTDMAHVLNVI 230
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_CYAP4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=gatA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.423e-13 Identity = 38/107 (35.51%), Postives = 56/107 (52.34%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 646 L GA +GKT +DEFA + N Y NP ++P +LG DT G +R P++FCG++G +P+YG VS G++ ++SLD +G FA Sbjct: 107 LAAAGAVMVGKTNLDEFAMGSSTENSAYQLTANPWDLQRVPGGSSGGSAAAVAAGETLIALGSDTGGSIRQPASFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFA 213
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAES (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.471e-13 Identity = 38/111 (34.23%), Postives = 59/111 (53.15%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 L + A IGK +DEFA + ++ NP + +P LV FSLG DT G +R P+++CG++G +P+YG VS G++ ++SLD +G R+ K Sbjct: 111 LHDENAVLIGKLNMDEFAMGGSTETSYFKKTLNPFDHTAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPASYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVK 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAEQ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.471e-13 Identity = 38/111 (34.23%), Postives = 59/111 (53.15%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 L + A IGK +DEFA + ++ NP + +P LV FSLG DT G +R P+++CG++G +P+YG VS G++ ++SLD +G R+ K Sbjct: 111 LHDENAVLIGKLNMDEFAMGGSTETSYFKKTLNPFDHTAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPASYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVK 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_NEOSM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neorickettsia sennetsu (strain Miyayama) GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.471e-13 Identity = 40/113 (35.40%), Postives = 59/113 (52.21%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQ----MPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 L++ GA +GK +DEFA + T+ + NP + +P FSLG DT G VR P++FCG++G RP+YG S G+IP++ SLD G +R+ Sbjct: 112 LIDAGAVMLGKANMDEFAMGSSNTSSFFGPVKNPLKGKKGVDLVPGGSSGGSAAAVADYYSPFSLGSDTGGSVRQPASFCGLVGLRPTYGRCSRWGMIPLANSLDQAGILSRN 224
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_MOOTA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Moorella thermoacetica (strain ATCC 39073) GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.471e-13 Identity = 38/109 (34.86%), Postives = 57/109 (52.29%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 L E GA +GK +DEFA + N + NP ++P F+LG DT G +R P++FCG++G +P+YG VS G++ ++SLD +G RD Sbjct: 111 LKEAGAVMLGKLNMDEFAMGSSTENSSFFPTRNPWDLERVPGGSSGGAVAAVAAGEAYFALGSDTGGSIRQPASFCGVVGMKPTYGRVSRYGLVAFASSLDQIGPITRD 219
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_BACST (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus stearothermophilus GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.471e-13 Identity = 38/104 (36.54%), Postives = 55/104 (52.88%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 GA IGK +DEFA + N + NP ++P V F+LG DT G +R P+AFCG++G +P+YG VS G++ ++SLD +G R Sbjct: 115 GAITIGKLNMDEFAMGSSTENSGFQLTRNPWDLKRVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITR 218 The following BLAST results are available for this feature:
BLAST of CF832911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 335
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832911 ID=CF832911; Name=CF832911; organism=Citrus sinensis; type=EST; length=743bpback to top |