CF832911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_ALKMQ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alkaliphilus metalliredigens (strain QYMF) GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.471e-13 Identity = 38/107 (35.51%), Postives = 56/107 (52.34%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 GA IGKT +DEFA + N + NP +++P ++G DT G +R P+AFCG +G +P+YG VS G+I ++SLD +G F + K Sbjct: 115 GAIIIGKTNMDEFAMGSSTENSAFKVTKNPWDLTKVPGGSSGGSAAALAAGFAPLTIGSDTGGSIRQPAAFCGTVGLKPTYGLVSRFGLIAFASSLDQIGPFTKTVK 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_PROM4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9211) GN=gatA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.839e-13 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWF 643 L E GA +GKT +DEFA + + +NP S++P L +LG DT G +R P++FCG++G +P+YG VS G++ ++SLD VG F Sbjct: 106 LWEAGAILLGKTNLDEFAMGSSTETSAFGATSNPWDLSRVPGGSSGGSAAAVASGLCLAALGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPF 211
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_CYAP8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain PCC 8801) GN=gatA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.839e-13 Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 L E GA +GKT +DEFA + N Y NP ++P + +LG DT G +R P++ CG++G +P+YG VS G++ +SLD +G F R Sbjct: 107 LQEIGAVMVGKTNLDEFAMGSSTENSGYQVTANPWDLERVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFGLVAYGSSLDQIGPFGR 214
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_CLOBB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=gatA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.839e-13 Identity = 39/107 (36.45%), Postives = 54/107 (50.47%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 G +GK +DEFA + N Y NP ++P V +LG DT G VR P++FCGI+G +P+YG VS G++ ++LD VG RD K Sbjct: 115 GGVILGKLNMDEFAMGSSTENSAYKITRNPWDLDRVPGGSSGGSAAAVASKEVPLALGTDTGGSVRQPASFCGIVGLKPTYGRVSRSGVVAYGSTLDQVGTLGRDVK 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_CLOBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=gatA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.839e-13 Identity = 39/107 (36.45%), Postives = 54/107 (50.47%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 G +GK +DEFA + N Y NP ++P V +LG DT G VR P++FCGI+G +P+YG VS G++ ++LD VG RD K Sbjct: 115 GGVILGKLNMDEFAMGSSTENSAYKITRNPWDLDRVPGGSSGGSAAAVASKEVPLALGTDTGGSVRQPASFCGIVGLKPTYGRVSRSGVVAYGSTLDQVGTLGRDVK 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_ACIAD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter sp. (strain ADP1) GN=gatA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.839e-13 Identity = 38/116 (32.76%), Postives = 60/116 (51.72%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 G +GK +DEFA + ++ NP A ++P DL F+ G DT G +R P++FCG+ G +P+YG VS G+I ++SLD G AR + ++ +V+ Sbjct: 115 GLVTLGKLNMDEFAMGSTSESSYFGATCNPWALDRVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGMIAYASSLDQGGPMARSAEDCAYLMNVM 230
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_PROM9 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9312) GN=gatA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13 Identity = 35/104 (33.65%), Postives = 56/104 (53.85%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 637 L G C+GKT +DEFA + + +NP S++P L ++G DT G +R P++FCG++G +P+YG VS G++ ++SLD +G Sbjct: 106 LWSSGGICLGKTNLDEFAMGSSTETSVFGVTSNPWDISRVPGGSSGGSAASVAAGLCSAAIGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIG 209
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_HALSA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Halobacterium salinarium GN=gatA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13 Identity = 34/104 (32.69%), Postives = 54/104 (51.92%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 637 L+ G T +GKT +DEF ++ NP +++P D +LG DT G VR P+A+CG++G +P+YG VS G++ + SL+ +G Sbjct: 60 LLAAGGTIVGKTNMDEFGMGTTTETSYFGPTKNPVDETRVPGGSSGGSAAAVANGDADLALGSDTGGSVRAPAAYCGVVGLKPTYGLVSRYGLVAYANSLEQIG 163
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_ANOFW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=gatA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13 Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 L E A +GK +DEFA + N + NP ++P V F+LG DT G +R P+AFCG++G +P+YG VS G++ ++SLD +G R Sbjct: 111 LNEADAVTVGKLNMDEFAMGSSTENSGFQLTRNPWDLERVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITR 218
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_TREDE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Treponema denticola GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 37/109 (33.94%), Postives = 57/109 (52.29%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 L+E GA +G+ +DE A + Y NP ++ P + FSLG +T G VR+P+++CGI G +P+YG S G++ S+SLD VG F ++ Sbjct: 114 LLEAGAVLMGRINMDELAMGSSTEFSCYGPSRNPVDRARTPGGSSGGSAAVVAGNQAPFSLGTETGGSVRLPASYCGIYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKE 222 The following BLAST results are available for this feature:
BLAST of CF832911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 335
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832911 ID=CF832911; Name=CF832911; organism=Citrus sinensis; type=EST; length=743bpback to top |