CF832911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STRTD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 350 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 IGKT +DEFA +G +Y N S++P V SLG DT G +R P+AF GI+G +P+YG VS G+I +SLD +G F++ K Sbjct: 117 IGKTNMDEFAMGGSGETSYYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSQTVK 219
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STRT2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 350 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 IGKT +DEFA +G +Y N S++P V SLG DT G +R P+AF GI+G +P+YG VS G+I +SLD +G F++ K Sbjct: 117 IGKTNMDEFAMGGSGETSYYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSQTVK 219
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STRT1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus thermophilus (strain CNRZ 1066) GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 350 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 IGKT +DEFA +G +Y N S++P V SLG DT G +R P+AF GI+G +P+YG VS G+I +SLD +G F++ K Sbjct: 117 IGKTNMDEFAMGGSGETSYYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSQTVK 219
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_PROMP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 35/100 (35.00%), Postives = 56/100 (56.00%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 637 G C+GKT +DEFA + + T +NP +++P L ++G DT G +R P++FCG++G +P+YG VS G+I ++SLD +G Sbjct: 110 GGICLGKTNLDEFAMGSSTETSVFGTTSNPWDVNRVPGGSSGGSAASVAAGLCLAAIGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLIAFASSLDQIG 209
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_NITOC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 48/149 (32.21%), Postives = 64/149 (42.95%), Query Frame = 2 Query: 203 TGLSFAVSDLFDIEGYVTGFGHPEWXXXXXXXXXXXXXXXXLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 TG+ A D+F G T G L GA +GKT +DEFA + Y + NP A ++P L + G DT G +R P+A CGI G +P+YG VS G+I ++SLD G AR Sbjct: 69 TGIPLAHKDIFCTTGVKTSCGSK--MLDNFTAPYNATVVSRLKTAGAVMLGKTNMDEFAMGSSNETSFYGSVKNPWAHDRVPGGSSGGSAAAVAARLTPAATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQGGPMAR 215
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_LEPIN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leptospira interrogans GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 37/109 (33.94%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 L+E G +T +DEFA + N + T NP ++P +V +LG DT G VR P++ CG+ G +P+YG VS G++ ++SLD +G F+R+ Sbjct: 112 LLEKGFILFPRTNMDEFAMGSSTENSAFQTTRNPFDLERIPGGSSGGSAAAVAASMVPLALGSDTGGSVRQPASLCGLYGLKPTYGTVSRYGLVAYASSLDQIGPFSRE 220
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_LEPIC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 37/109 (33.94%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 L+E G +T +DEFA + N + T NP ++P +V +LG DT G VR P++ CG+ G +P+YG VS G++ ++SLD +G F+R+ Sbjct: 112 LLEKGFILFPRTNMDEFAMGSSTENSAFQTTRNPFDLERIPGGSSGGSAAAVAASMVPLALGSDTGGSVRQPASLCGLYGLKPTYGTVSRYGLVAYASSLDQIGPFSRE 220
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_DESAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfatibacillum alkenivorans (strain AK-01) GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 37/108 (34.26%), Postives = 57/108 (52.78%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 L E GA +GKT +DEFA + N + T NP ++ P D+ + G DT G +R P + C ++G +P+YG VS G++ ++SLD +G FA+ Sbjct: 110 LKEAGAVLVGKTNMDEFAMGSSTENSAFKTTKNPWDLTRTPGGSSGGSAAAVAADMCLGAFGSDTGGSIRQPGSHCSVVGLKPTYGRVSRYGLVAFASSLDQIGPFAK 217
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_CLOPH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 38/108 (35.19%), Postives = 55/108 (50.93%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 L + GA +GKT +DEFA ++ NP +P + +LG DT G +R PSAFCG+ G +P+YG VS G++ ++SLD +G AR Sbjct: 112 LKDAGAIILGKTNMDEFAMGSTTETSYFGATKNPWNIECIPGGSSGGSAAAVAAEEAFIALGTDTGGSIRQPSAFCGVTGIKPTYGTVSRYGLVAYASSLDQIGPIAR 219
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_BACSU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus subtilis GN=gatA PE=3 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 39/108 (36.11%), Postives = 55/108 (50.93%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 L + A IGK +DEFA + N Y NP +P V FSLG DT G +R P++FCG++G +P+YG VS G++ ++SLD +G R Sbjct: 111 LQDAEAVTIGKLNMDEFAMGSSTENSAYKLTKNPWNLDTVPGGSSGGSAAAVAAGEVPFSLGSDTGGSIRQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITR 218 The following BLAST results are available for this feature:
BLAST of CF832911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 335
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832911 ID=CF832911; Name=CF832911; organism=Citrus sinensis; type=EST; length=743bpback to top |