CF832911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_BACSK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus clausii (strain KSM-K16) GN=gatA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 36/100 (36.00%), Postives = 53/100 (53.00%), Query Frame = 2 Query: 350 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 IGK +DEFA + N + TNP +P V F+LG DT G +R P+A+CG++G +P+YG VS G++ ++SLD +G R Sbjct: 117 IGKINMDEFAMGSSNENSAFQVTTNPWNTDYVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITR 216
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA1_CLOAB (Glutamyl-tRNA(Gln) amidotransferase subunit A 1 OS=Clostridium acetobutylicum GN=gatA1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 37/109 (33.94%), Postives = 56/109 (51.38%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 L + IGK +DEFA + N + NP + ++P SLG +T G VR P++FCG++G +P+YG +S G++ ++LD VG FARD Sbjct: 111 LKKNNGVIIGKANMDEFAMGSSTENSAFKVSKNPWSLERVPGGSSGGSAVAVASLEAPISLGTETGGSVRQPASFCGLVGLKPTYGRISRYGVVAFGSTLDQVGMFARD 219
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAAN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain N315) GN=gatA PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.301e-12 Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 A IGK +DEFA + ++ NP +P LV SLG DT G +R P+A+CG++G +P+YG VS G++ ++SLD +G R+ K Sbjct: 116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAAM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gatA PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.301e-12 Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 A IGK +DEFA + ++ NP +P LV SLG DT G +R P+A+CG++G +P+YG VS G++ ++SLD +G R+ K Sbjct: 116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAA1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=gatA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.301e-12 Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 A IGK +DEFA + ++ NP +P LV SLG DT G +R P+A+CG++G +P+YG VS G++ ++SLD +G R+ K Sbjct: 116 AVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVK 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_RALSO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ralstonia solanacearum GN=gatA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.301e-12 Identity = 39/108 (36.11%), Postives = 55/108 (50.93%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 L G +GKT +DEFA + N H+ NP +++P DL + G DT G +R P++F GI G +P+YG VS G+I ++SLD G AR Sbjct: 107 LAAAGMVTLGKTNMDEFAMGSSNENSHFGPVKNPWDVARVPGGSSGGSAAAVAADLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMAR 214
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_OCEIH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Oceanobacillus iheyensis GN=gatA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.301e-12 Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = 2 Query: 350 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 637 +GK +DEFA + N Y+ NP +P V F+LG DT G +R P+AFCG++G +P+YG VS G++ ++SLD +G Sbjct: 117 VGKLNMDEFAMGSSNENSGYEPTRNPWNTEHVPGGSSGGSAAAVAAGEVLFTLGSDTGGSIRQPAAFCGVVGMKPTYGRVSRFGLVAFASSLDQIG 212
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_MYCPN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycoplasma pneumoniae GN=gatA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.301e-12 Identity = 45/139 (32.37%), Postives = 68/139 (48.92%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR--------DPKILRHVGHVLLQLPFAAQRSP 718 L GA +GK +DEF G + + +P + +P +V FS+G DT VR P++ C I+GF+P+YG +S G+ P + SLD VG FAR +I++H + F+AQ+SP Sbjct: 100 LNNSGALLVGKANLDEFGLGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPASICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVYDVALVSDEIIKHD-----KADFSAQKSP 233
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_GEOKA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus kaustophilus GN=gatA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.301e-12 Identity = 37/104 (35.58%), Postives = 54/104 (51.92%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 G IGK +DEFA + N + NP ++P V F+LG DT G +R P+AFCG++G +P+YG VS G++ ++SLD +G R Sbjct: 115 GTITIGKLNMDEFAMGSSTENSGFQLTRNPWDLERVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITR 218
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_EUBE2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=gatA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.301e-12 Identity = 37/109 (33.94%), Postives = 54/109 (49.54%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 L GA IGKT +DEFA + NP P +P + +LG DT G +R P+++CG++G +P+YG VS G+I +SLD +G +D Sbjct: 111 LQNAGAVIIGKTNMDEFAMGSTTETSAFGATKNPRNPEHVPGGSSGGSAAAVAANECFAALGSDTGGSIRQPASYCGVVGLKPTYGTVSRYGLIAYGSSLDQIGPLCKD 219 The following BLAST results are available for this feature:
BLAST of CF832911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 335
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832911 ID=CF832911; Name=CF832911; organism=Citrus sinensis; type=EST; length=743bpback to top |