CF832911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_CHLSY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=gatA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.239e-15 Identity = 47/123 (38.21%), Postives = 62/123 (50.41%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG---WFARDPKILRHV--GH 679 LV GA +GK DEFA + N Y TNP P+++P V +LG DT G +R P+A CGI G +P+YG VS G+I +SLD +G W D +L +V GH Sbjct: 112 LVAAGAVLVGKLNCDEFAMGSSTENSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLAVLLNVIAGH 234
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_CHLAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=gatA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.239e-15 Identity = 47/123 (38.21%), Postives = 62/123 (50.41%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG---WFARDPKILRHV--GH 679 LV GA +GK DEFA + N Y TNP P+++P V +LG DT G +R P+A CGI G +P+YG VS G+I +SLD +G W D +L +V GH Sbjct: 112 LVAAGAVLVGKLNCDEFAMGSSTENSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLAVLLNVIAGH 234
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_ACIBL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidobacteria bacterium (strain Ellin345) GN=gatA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.239e-15 Identity = 43/111 (38.74%), Postives = 58/111 (52.25%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 L GA +GKT DEFA + N Y NP S++P SLG DT G +R P++FCG++G P+YG VS G+I ++SLD +G FA+D K Sbjct: 111 LEAAGAVILGKTNCDEFAMGSSNENSAYGPVRNPRDKSRVPGGSSGGSAAVVAAGTAVTSLGSDTGGSIRQPASFCGVVGLMPTYGRVSRYGLIAFASSLDHIGPFAKDVK 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_METST (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosphaera stadtmanae (strain DSM 3091) GN=gatA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.148e-15 Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 +++ IG T +DEFA + Y NP AP +P ++ D +LG DT G +R P++ CG++GF+P+YG VS G++ ++ SLD +G FA D Sbjct: 106 ILDEDGVIIGLTNMDEFAAGSSTETSMYGPTNNPKAPGHIPGGSSGGSAAAIAANMCDITLGSDTGGSIRNPASHCGVMGFKPTYGMVSRQGLLDLAMSLDQIGPFAND 214
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_DEHE1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides ethenogenes (strain 195) GN=gatA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.148e-15 Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 L E GA +GKT +DEFA + N + T NP +++P FSLG DT G +R P++FC + G +PSYG VS G++ ++SLD +G F +D Sbjct: 111 LAEEGAVLLGKTNMDEFAMGSSTENSAFFTTHNPWNTAKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFCSVTGLKPSYGMVSRYGLVAFASSLDQIGPFTKD 219
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_THEPX (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter sp. (strain X514) GN=gatA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14 Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 L+E G +GK+ +DEFA + N + T NP S++P D F+LG DT G +R P++ CG++G +P+YG VS G++ ++SLD +G F +D Sbjct: 110 LLEEGVIILGKSNLDEFAMGSSTENSAFKTTKNPWDLSRVPGGSSGGSAAAIAADEAAFALGSDTGGSIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKD 218
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_THEP3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gatA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14 Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 L+E G +GK+ +DEFA + N + T NP S++P D F+LG DT G +R P++ CG++G +P+YG VS G++ ++SLD +G F +D Sbjct: 110 LLEEGVIILGKSNLDEFAMGSSTENSAFKTTKNPWDLSRVPGGSSGGSAAAIAADEAAFALGSDTGGSIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKD 218
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_METMP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis GN=gatA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14 Identity = 39/100 (39.00%), Postives = 55/100 (55.00%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 637 GA +G T +DEFA +G Y NPAA ++P DL D ++G DT G +R P++ CGI+GF+PSYG VS G+ ++ S D +G Sbjct: 91 GALIVGMTNMDEFAGGSSGETSCYGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIG 190
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_METVS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=gatA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.390e-14 Identity = 38/100 (38.00%), Postives = 55/100 (55.00%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 637 GA IG T +DEFA +G +Y NP A ++P DL D +LG DT G +R P++ CG++GF+P+YG VS G+ ++ S D +G Sbjct: 91 GALIIGMTNMDEFASGSSGETSYYGPTKNPKALDRIPGGSSSGSAAAVSADLCDMALGSDTGGSIRNPASHCGVVGFKPTYGVVSRQGLCDLAMSFDQIG 190
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_METM5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=gatA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.390e-14 Identity = 39/100 (39.00%), Postives = 55/100 (55.00%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 637 GA +G T +DEFA +G Y NPAA ++P DL D ++G DT G +R P++ CGI+GF+PSYG VS G+ ++ S D +G Sbjct: 91 GALIVGMTNMDEFAGGSSGETSCYGPTKNPAALDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIG 190 The following BLAST results are available for this feature:
BLAST of CF832911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 335
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832911 ID=CF832911; Name=CF832911; organism=Citrus sinensis; type=EST; length=743bpback to top |