CF832911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_LACDB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=gatA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 2 Query: 341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 AT IGKT +DEFA + ++ NP +++P V +LG DT G +R P++F GI G +P+YG VS G+I ++SLD +G ++ K V +V+ Sbjct: 107 ATIIGKTNMDEFAMGSSTETSYFGDTKNPWNLNKVPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPASFNGIFGIKPTYGRVSRWGLIAFASSLDQIGVMSKRVKDSAEVLNVI 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_LACDA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=gatA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 2 Query: 341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 AT IGKT +DEFA + ++ NP +++P V +LG DT G +R P++F GI G +P+YG VS G+I ++SLD +G ++ K V +V+ Sbjct: 107 ATIIGKTNMDEFAMGSSTETSYFGDTKNPWNLNKVPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPASFNGIFGIKPTYGRVSRWGLIAFASSLDQIGVMSKRVKDSAEVLNVI 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_EHRCJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ehrlichia canis (strain Jake) GN=gatA PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 39/112 (34.82%), Postives = 56/112 (50.00%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQ----MPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 L+ GA +GK +DEFA + +N + NP + +P L +LG DT G VR P+AFCGI+G +P+YG S +G+I ++SLD G R Sbjct: 111 LLNNGAVMLGKLNMDEFAMGSSNSNSCFGNVKNPWIRADGAEVVPGGSSGGSSAAVAGFLCAGALGSDTGGSVRQPAAFCGIVGLKPTYGRCSRLGMIAFASSLDQAGVLTR 222
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_CLOTE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium tetani GN=gatA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 35/101 (34.65%), Postives = 50/101 (49.50%), Query Frame = 2 Query: 350 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 +GK +DEFA + N Y NP ++P +LG DT G VR P+AFCG++G +P+YG S G I ++LD VG ++D Sbjct: 119 LGKVNMDEFAMGSSTENSAYKKTRNPWDLDRVPGGSSGGSAAAVAAMETPLALGTDTGGSVRQPAAFCGLVGLKPTYGRTSRYGAIAFGSTLDQVGMLSKD 219
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_CLOK1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium kluyveri (strain NBRC 12016) GN=gatA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 33/101 (32.67%), Postives = 51/101 (50.50%), Query Frame = 2 Query: 350 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 IGKT +DEFA + N NP +++P S+G DT G +R P++FCG++G +P+YG +S G + ++LD +G A D Sbjct: 119 IGKTNMDEFAMGSSTENSSIKLSRNPWDLNRVPGGSSGGSAISVAAGEAALSIGTDTGGSIRQPASFCGVVGLKPTYGRISRYGAVAFGSTLDQIGTIAAD 219 The following BLAST results are available for this feature:
BLAST of CF832911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 335
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832911 ID=CF832911; Name=CF832911; organism=Citrus sinensis; type=EST; length=743bpback to top |