CF832911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_DESAD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=gatA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 41/108 (37.96%), Postives = 56/108 (51.85%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 L E GA +GK +DEFA N Y T TNP S++P +LG DT G +R+P++FCG +G +P+YG VS G+I +SLD +G R Sbjct: 110 LKEAGAIIVGKANMDEFAMGSTTENSAYQTTTNPWDASRVPGGSSGGSGATVAAGQCYAALGTDTGGSIRLPASFCGCVGVKPTYGRVSRYGMIAYGSSLDQIGPMTR 217
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAS1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=gatA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14 Identity = 40/106 (37.74%), Postives = 56/106 (52.83%), Query Frame = 2 Query: 341 ATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 A IGK +DEFA + +Y NP + +P LV FSLG DT G +R P+A+CGI+G +P+YG VS G++ ++SLD +G R K Sbjct: 116 AVLIGKLNMDEFAMGGSTETSYYKKTVNPFDHTAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGIVGLKPTYGRVSRFGLVAFASSLDQIGPLTRTVK 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_HAHCH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Hahella chejuensis (strain KCTC 2396) GN=gatA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14 Identity = 46/148 (31.08%), Postives = 67/148 (45.27%), Query Frame = 2 Query: 206 GLSFAVSDLFDIEGYVTGFGHPEWXXXXXXXXXXXXXXXXLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 G+ A D+F EG T G ++ GA +GKT +DEFA + N ++ NP + P L + G DT G +R P+AFCG+ G +P+YG VS +G++ ++SLD G FAR Sbjct: 70 GVPLAHKDVFCTEGVTTTCGSR--MLEKFVPPYESTVTRKFIDAGAVTLGKTNMDEFAMGSSNENSYFGPVRNPWDTERAPGGSSGGSAAAVAAGLCAAATGTDTGGSIRQPAAFCGLTGLKPTYGRVSRLGMVAFASSLDQGGPFAR 215
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_GEOSW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus sp. (strain WCH70) GN=gatA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14 Identity = 40/108 (37.04%), Postives = 57/108 (52.78%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 L E GA IGK +DEFA + N + NP ++P V F+LG DT G +R P+AFCG++G +P+YG VS G++ ++SLD +G R Sbjct: 112 LNEAGAITIGKLNMDEFAMGSSTENSGFQLTRNPWDLERVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITR 219
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_NATTJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=gatA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 637 L E GA +GKT +DEFA + N + +NP ++P V +LG DT G +R P++FCG++G +P+YG VS G++ ++SLD +G Sbjct: 111 LAEAGAIIVGKTNMDEFAMGSSTENSAFFVTSNPWDTERVPGGSSGGSAASVASAQVPLALGSDTGGSIRQPASFCGVVGMKPTYGRVSRYGLVAFASSLDQIG 214
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_METBF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gatA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 L+ GA +GKT +DEFA + ++ NP ++P F+LG DT G VR P+AFCG++G +P+YGAVS G++ + SL+ VG A + Sbjct: 101 LLAAGAVILGKTNMDEFAMGSSTETSYFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANN 209
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_MARMS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Marinomonas sp. (strain MWYL1) GN=gatA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 49/157 (31.21%), Postives = 69/157 (43.95%), Query Frame = 2 Query: 203 TGLSFAVSDLFDIEGYVTGFGHPEWXXXXXXXXXXXXXXXXLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHV 673 TG+ A DLF EG +T G + + GA +GKT +DEFA + N Y NP +P L + G DT G +R P++FCGI G +P+YG VS G+I ++SLD G A+ + H+ Sbjct: 69 TGIPVAHKDLFCTEGTLTTCGSK--MLHNFVPPYESTVTSRIQQAGAVMLGKTNMDEFAMGSSNENSFYGAVKNPWNLDMVPGGSSGGSAAAIAAGLAVAATGTDTGGSIRQPASFCGITGLKPTYGRVSRFGMIAYASSLDQGGPMAKSAEDCAHL 223
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_CYAP7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp. (strain PCC 7424) GN=gatA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 38/108 (35.19%), Postives = 60/108 (55.56%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 L + GA +GKT +DEFA + + Y NP S++P + +LG DT G +R P+++CG++G +P+YG VS G++ ++SLD +G FAR Sbjct: 107 LKDSGAITLGKTNLDEFAMGSSTESSGYQVTANPWDLSRVPGGSSGGSAAAVASEECVVALGSDTGGSIRQPASYCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFAR 214
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_SYNAS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophus aciditrophicus (strain SB) GN=gatA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 47/150 (31.33%), Postives = 68/150 (45.33%), Query Frame = 2 Query: 203 TGLSFAVSDLFDIEGYVTGFGHPEWXXXXXXXXXXXXXXXXLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 TG+ A+ D++ G T G L E GA GKT +DEFA + +Y NP ++P D +LG DT G +R P+A CG++G +P+YG VS G+I ++SLD +G F +D Sbjct: 71 TGIPVALKDIYCTRGVRTTCG--SLILDNFIPPYDATVVVKLREAGAVFTGKTNMDEFAMGSSTETSYYGFTRNPWDLERIPGGSSGGSAAAVAADECIAALGSDTGGSIRQPAALCGVVGMKPTYGRVSRFGLIAFASSLDQIGPFTKD 218
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_MICAN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Microcystis aeruginosa (strain NIES-843) GN=gatA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 GA +GKT +DEFA + N Y NP S++P +LG DT G +R P++FCG++G +P+YG VS G++ ++SLD +G F R Sbjct: 111 GAVIVGKTNLDEFAMGSSTENSGYHVTANPWDLSRVPGGSSGGSAAAVAAQECVVALGSDTGGSIRQPASFCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFGR 214 The following BLAST results are available for this feature:
BLAST of CF832911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 335
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832911 ID=CF832911; Name=CF832911; organism=Citrus sinensis; type=EST; length=743bpback to top |