CF832911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STRP4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 41/103 (39.81%), Postives = 54/103 (52.43%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 646 G +GKT +DEFA +G HY N S++P V SLG DT G +R P+AF GI+G +P+YG VS G+I +SLD +G FA Sbjct: 113 GMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFA 215
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STRP2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 41/103 (39.81%), Postives = 54/103 (52.43%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFA 646 G +GKT +DEFA +G HY N S++P V SLG DT G +R P+AF GI+G +P+YG VS G+I +SLD +G FA Sbjct: 113 GMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFA 215
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_STAHJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus haemolyticus (strain JCSC1435) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 39/111 (35.14%), Postives = 59/111 (53.15%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 L + A IGK +DEFA + ++ NP + +P LV FSLG DT G +R P+A+CG++G +P+YG VS G++ ++SLD +G R+ K Sbjct: 111 LHDENAILIGKLNMDEFAMGGSTETSYFKQTVNPFDHTAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVK 221
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_PROMT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain NATL2A) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 L+ GA IGKT +DEFA + + NP +++P L SLG DT G +R P++FCG++G +P+YG VS G+I ++SLD VG FA + Sbjct: 106 LLNAGAIMIGKTNMDEFAMGSSTETSAFGPTLNPWNITKVPGGSSGGSAASVAAGLCYGSLGSDTGGSIRQPASFCGVVGMKPTYGRVSRWGLIAFASSLDQVGPFANN 214
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_PROM1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain NATL1A) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARD 652 L+ GA IGKT +DEFA + + NP +++P L SLG DT G +R P++FCG++G +P+YG VS G+I ++SLD VG FA + Sbjct: 106 LLNAGAIMIGKTNMDEFAMGSSTETSAFGPTLNPWNITKVPGGSSGGSAASVAAGLCYGSLGSDTGGSIRQPASFCGVVGMKPTYGRVSRWGLIAFASSLDQVGPFANN 214
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_MARAV (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 50/153 (32.68%), Postives = 66/153 (43.14%), Query Frame = 2 Query: 203 TGLSFAVSDLFDIEGYVTGFGHPEWXXXXXXXXXXXXXXXXLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNP----AAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 TG+ FA D+F G T G GA C+GKT +DEFA + + Y TNP ++P LV + G DT G +R P+A CGI G +P+YG VS G+I ++SLD G AR Sbjct: 69 TGVPFAHKDIFCTSGIRTSCGSK--MLDNFVPPYDATVTANFKAAGAVCLGKTNMDEFAMGSSNESSFYGAVTNPWGLSGGDKRVPGGSSGGSAAAVAARLVPAATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQGGPMAR 219
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_MACCJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Macrococcus caseolyticus (strain JCSC5402) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 37/103 (35.92%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 350 IGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 +GK +DEFA + N Y NP +P LV FSLG DT G +R P+++CG++G +P+YG VS G++ ++SLD +G R+ K Sbjct: 115 VGKLNMDEFAMGGSTENSFYKKTVNPFDHKAVPGGSSGGSAAAVAASLVPFSLGSDTGGSIRQPASYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVK 217
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_HALMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Haloarcula marismortui GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 38/104 (36.54%), Postives = 54/104 (51.92%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG 637 L + GAT GKT +DEF + NPAA ++P D +LG DT G +R P+AFCG++G +P+YG VS G+I + SL+ +G Sbjct: 61 LKDAGATIPGKTNMDEFGMGTTTETSAFGAVENPAAEGRVPGGSSGGSAAVVAAGDADLALGSDTGGSIRCPAAFCGVVGIKPTYGLVSRYGLIAYANSLEQIG 164
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_GEOTN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus thermodenitrificans (strain NG80-2) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 39/104 (37.50%), Postives = 55/104 (52.88%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFAR 649 GA IGK +DEFA + N + NP ++P V FSLG DT G +R P+AFCG++G +P+YG VS G++ ++SLD +G R Sbjct: 115 GAITIGKLNMDEFAMGSSTENSGFQLTRNPWDLERVPGGSSGGSAAAVAAGEVPFSLGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITR 218
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_CHLAD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 45/123 (36.59%), Postives = 60/123 (48.78%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVG---WFARDPKILRHV--GH 679 L+ G IGK DEFA + N Y TNP S++P V +LG DT G +R P+A CGI G +P+YG VS G+I +SLD +G W D ++ +V GH Sbjct: 112 LLAAGTVLIGKLNCDEFAMGSSTENSAYQITTNPWDTSRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLALIMNVIAGH 234 The following BLAST results are available for this feature:
BLAST of CF832911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 335
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832911 ID=CF832911; Name=CF832911; organism=Citrus sinensis; type=EST; length=743bpback to top |