CF832911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_BRAHW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 39/111 (35.14%), Postives = 59/111 (53.15%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 L++ GA IG+T +DEFA +Y NP + +P + +LG DT G +R P++FCGI+G +P+YG V +G I +++SLD VG +D K Sbjct: 113 LIDNGAIIIGRTNMDEFAMGGTTETSNYGVTRNPKNRAHVPGGSSGGSAAAVAANFAFGALGSDTGGSIRQPASFCGIVGVKPTYGRVPRLGCIAMASSLDQVGPLTKDVK 223
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_AZOSE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azoarcus sp. (strain EbN1) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 48/147 (32.65%), Postives = 66/147 (44.90%), Query Frame = 2 Query: 203 TGLSFAVSDLFDIEGYVTGFGHPEWXXXXXXXXXXXXXXXXLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWF 643 TG+ A D+F EG +T G L GA +GKT +DEFA + N H+ NP +++P LV + G DT G VR P+A G+ G +P+YG VS G+I ++SLD G F Sbjct: 69 TGIPLAHKDVFCTEGVLTTCGSK--MLANFVSPYDAHVVSLLKTAGAVSLGKTNMDEFAMGSSNENSHFGPAKNPWDTTRIPGGSSGGSAAAVAARLVPIATGTDTGGSVRQPAALTGVTGIKPTYGVVSRYGMIAYASSLDQGGAF 213
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_AZOSB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azoarcus sp. (strain BH72) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 48/147 (32.65%), Postives = 67/147 (45.58%), Query Frame = 2 Query: 203 TGLSFAVSDLFDIEGYVTGFGHPEWXXXXXXXXXXXXXXXXLVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWF 643 TG+ A DLF EG +T G L + GA +GKT +DEFA + + HY NP +++P LV + G DT G VR P++ G+ G +P+YG VS G+I ++SLD G F Sbjct: 69 TGIPLAHKDLFCTEGVLTTCGSK--MLADFVSPYDAHVVSRLKDAGAVSLGKTNMDEFAMGSSNESSHYGAVRNPWDTTRIPGGSSGGSAAAVAARLVPLATGSDTGGSVRQPASHTGVTGIKPTYGVVSRYGMIAYASSLDQGGAF 213
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_ACIBY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain AYE) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 39/116 (33.62%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 G +GK +DEFA + + +NP A +P DL F+ G DT G +R P++FCG+ G +P+YG VS GII ++SLD G AR + ++ +V+ Sbjct: 115 GLVTLGKVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVI 230
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_ACIBT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=gatA PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 39/116 (33.62%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 G +GK +DEFA + + +NP A +P DL F+ G DT G +R P++FCG+ G +P+YG VS GII ++SLD G AR + ++ +V+ Sbjct: 115 GLVTLGKVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVI 230
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_ACIBS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain SDF) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 39/116 (33.62%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 G +GK +DEFA + + +NP A +P DL F+ G DT G +R P++FCG+ G +P+YG VS GII ++SLD G AR + ++ +V+ Sbjct: 115 GLVTLGKVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVI 230
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_ACIBC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain ACICU) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 39/116 (33.62%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 G +GK +DEFA + + +NP A +P DL F+ G DT G +R P++FCG+ G +P+YG VS GII ++SLD G AR + ++ +V+ Sbjct: 115 GLVTLGKVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVI 230
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_ACIB5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain AB0057) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 39/116 (33.62%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 G +GK +DEFA + + +NP A +P DL F+ G DT G +R P++FCG+ G +P+YG VS GII ++SLD G AR + ++ +V+ Sbjct: 115 GLVTLGKVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVI 230
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_ACIB3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain AB307-0294) GN=gatA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 39/116 (33.62%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 338 GATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL 685 G +GK +DEFA + + +NP A +P DL F+ G DT G +R P++FCG+ G +P+YG VS GII ++SLD G AR + ++ +V+ Sbjct: 115 GLVTLGKVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVI 230
BLAST of CF832911 vs. ExPASy Swiss-Prot
Match: GATA_UNCTG (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=gatA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 38/111 (34.23%), Postives = 57/111 (51.35%), Query Frame = 2 Query: 326 LVEGGATCIGKTVVDEFAYSINGTNKHYDTPTNPAAPSQMPXXXXXXXXXXXXXDLVDFSLGIDTVGGVRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK 658 L E G +G+T +DEFA + Y NP +P +V F+LG DT G +R P+ FCGI+G++PSYG +S G +++S D +G F++ K Sbjct: 112 LKEAGVIFVGRTNMDEFAMGGSTETSVYQKTANPWNIDYIPGGSSGGSAAAVSSGMVPFALGSDTGGSIRQPAGFCGIVGYKPSYGLISRYGACALASSFDQIGVFSKTVK 222 The following BLAST results are available for this feature:
BLAST of CF832911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 335
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832911 ID=CF832911; Name=CF832911; organism=Citrus sinensis; type=EST; length=743bpback to top |