CF834233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.601e-12 Identity = 56/171 (32.75%), Postives = 81/171 (47.37%), Query Frame = 3 Query: 108 RAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN----GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 596 RA +AEF++T +F++ + M +K T A ISGGH+NPAVTFG F+ +SL R I Y I Q LG+ ++K G A ++ G + + EIV TF LVYTV+ +A D K+ + + +AP+ IGF V Sbjct: 58 RAGIAEFVATFLFLYITVLTVMGVSKSTSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVF-SATDAKRNARDSHVPILAPLPIGFAV 225
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 6.009e-12 Identity = 56/177 (31.64%), Postives = 84/177 (47.46%), Query Frame = 3 Query: 108 RAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNG----QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 596 RA +AEF++T +F++ + M + + A+ ISGGH+NPAVTFG F+ +SL R + Y + Q LG+ ++K + TNG + SG+GA EIV TF LVYTV+ +A D K+ + + +AP+ IGF V Sbjct: 53 RAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGA------EIVGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 220
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.009e-12 Identity = 55/171 (32.16%), Postives = 82/171 (47.95%), Query Frame = 3 Query: 108 RAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN----GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 596 RA +AEF++T +F++ + M +K + A ISGGH+NPAVTFG F+ +SL R I Y + Q LG+ ++K G A ++SG + + EIV TF LVYTV+ +A D K+ + + +AP+ IGF V Sbjct: 55 RAGIAEFVATFLFLYITILTVMGVSKSSSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVF-SATDAKRNARDSHVPILAPLPIGFAV 222
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 6.009e-12 Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = 3 Query: 279 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT------NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAGG 620 NISGGH NPAV+ A + G ++L+ + YW++QLLG + L K V+ N + + A+V EI++T L V A++ K + G +AP +IGF V +ILAGG Sbjct: 85 NISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEK--TKGPLAPFSIGFAVTVDILAGG 202
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.848e-12 Identity = 55/171 (32.16%), Postives = 81/171 (47.37%), Query Frame = 3 Query: 108 RAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN----GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 596 RA +AEF++T +F++ + M +K T A ISGGH+NPAVTFG F+ +SL R + Y I Q LG+ ++K G A ++ G + + EIV TF LVYTV+ +A D K+ + + +AP+ IGF V Sbjct: 55 RAGIAEFVATFLFLYITILTVMGVSKSTSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVF-SATDAKRNARDSHVPILAPLPIGFAV 222
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: NIP14_ORYSJ (Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica GN=NIP1-4 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.848e-12 Identity = 52/172 (30.23%), Postives = 80/172 (46.51%), Query Frame = 3 Query: 105 LRAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAGG 620 L+ LAEFL+T +FAG G+ K GA T ++SG H+NPAVT G V G R Y +AQ +T A ++L+ + G+ A G ++V E V+TF L++ + A A D + ++G +A +A+G + N+L G Sbjct: 56 LQMLLAEFLATFFLMFAGLGAITVEEK---KGAVT---FPGVAVAWGAAVMAMVYAVGHVSGAHLNPAVTLGFAVAGRFPWRRAPAYALAQTAAATAASVVLRLMFGGRHAPVPATLPGGAHAQSLVIEFVITFYLMFVIMAVATDDQ--AVGHMAGVAVGGTIMLNVLFAG 219
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.848e-12 Identity = 51/173 (29.48%), Postives = 82/173 (47.40%), Query Frame = 3 Query: 108 RAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT--NGQTTSAF-ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAG 617 +A AEFL+TLIFVF G GS + + + +SGGH+NPA+T +G ISLLR + Y AQL+G+ +L ++ N + A AL++ A+V E+++TF L ++++ + +G+ A ++IG V L G Sbjct: 12 KAVFAEFLATLIFVFFGLGSALKW-------PSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVG 176
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.025e-11 Identity = 58/187 (31.02%), Postives = 87/187 (46.52%), Query Frame = 3 Query: 78 PREATHPDALRAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK--------FVTNGQTTSA--FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 596 P E + RA +AEF++T +F++ + M + + A+ ISGGH+NPAVTFG F+ +SL R + Y I Q LG+ ++K + G T A + SG+GA EI+ TF LVYTV+ +A D K+ + + +AP+ IGF V Sbjct: 43 PGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGA------EIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 220
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.284e-11 Identity = 55/172 (31.98%), Postives = 80/172 (46.51%), Query Frame = 3 Query: 108 RAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG-----QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKK----GSLGTIAPIAIGFIV 596 RAA+AEF +TL+ V + + + + G + ISGGH+NPAVTF + +SL R LY +AQ +G+ L + + G A L++G A VV E+V TF LVYTV+ +A DPK+ + +AP+ IG V Sbjct: 35 RAAIAEFTATLLLVCISVSTVIGEKRQSGEGG---AGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVF-SATDPKRKARDSHVPVLAPLPIGLAV 202
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: AQP8_RAT (Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.284e-11 Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 3 Query: 279 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFAL-SSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAGG 620 NISGGH NPAV+ + G + + I YW++QL G + L K V+ + + +AFA+ A+ EIVMT LV V A++ K ++G +AP +IGF V +ILAGG Sbjct: 87 NISGGHFNPAVSLAVTLVGGLKTMLLIPYWVSQLFGGMIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGVEIVMTMLLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGG 204 The following BLAST results are available for this feature:
BLAST of CF834233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 104
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834233 ID=CF834233; Name=CF834233; organism=Citrus sinensis; type=EST; length=621bpback to top |