CF834233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 1.504e-71 Identity = 140/191 (73.30%), Postives = 148/191 (77.49%), Query Frame = 3 Query: 48 MPP*NIAVGHPREATHPDALRAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAGG 620 MP NIA+G P EAT PDAL+AALAEF+STLIFV AG GSGMAFNKLT NGA TPS NISGGHVNPAVTFGAF+GGNI+LLRGILYWIAQLLGS VACL+LKF T G AF LS+GVG NA VFEIVMTFGLVYTVYATA+DPK GSLGTIAPIAIGFIV ANILAGG Sbjct: 1 MPIRNIAIGRPDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGG 191
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 5.913e-68 Identity = 131/191 (68.59%), Postives = 144/191 (75.39%), Query Frame = 3 Query: 48 MPP*NIAVGHPREATHPDALRAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAGG 620 MP IAVG P E +HPD +AA+AEF+S LIFVFAG GSGMAF+KLT G TPS NISGGHVNPAVTFGAFVGGNISL++ ++YW+AQLLGS VACLLLK T G AF+LS+GVGAWNAVVFEIVMTFGLVYTVYATA+DPKKG LG IAPIAIGFIV ANILAGG Sbjct: 1 MPVSRIAVGAPGELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGG 191
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 8.538e-67 Identity = 133/192 (69.27%), Postives = 146/192 (76.04%), Query Frame = 3 Query: 48 MPP*NIAVGHPREAT-HPDALRAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAGG 620 MP NIA+G +E HP+ALRAALAEF+STLIFVFAG GSG+AFNK+T NGA TPS NISGGHVNPAVTFG +GGNI+LLRGILYWIAQLLGS AC LL F T G+ AF LS+GVG+ NA+VFEIVMTFGLVYTVYATA+DPK GSLGTIAPIAIGFIV ANILAGG Sbjct: 1 MPTRNIAIGGVQEEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLSFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGG 192
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 3.244e-66 Identity = 130/191 (68.06%), Postives = 144/191 (75.39%), Query Frame = 3 Query: 48 MPP*NIAVGHPREATHPDALRAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAGG 620 MP IAVG P E +HPD +AA+AEF+STLIFVFAG GSGMAF+KLT GA TP+ NISGGHVNPAVTFGAFVGGNISLL+ ++YW+AQLLGS VACLLLK T G AF+LS+GVGA NAVV E+VMTFGLVYTVYATA+DPKKG LG IAPIAIGFIV ANILAGG Sbjct: 1 MPVSRIAVGAPGELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGG 191
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 4.237e-66 Identity = 132/191 (69.11%), Postives = 144/191 (75.39%), Query Frame = 3 Query: 48 MPP*NIAVGHPREATHPDALRAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAGG 620 MP NIAVG +E HP AL+AALAEF+STLIFVFAG+GSGMAF+KLT GA TP+ NISGGHVNPAVTFGAFVGGNI+L RG+LYWIAQLLGSTVAC LL+F T G T F L +GV W A+V EIVMTFGLVYTVYATA+DPKKGSLGTIAPIAIGFIV ANIL GG Sbjct: 1 MPIRNIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLATGTFGL-TGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGG 190
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.044e-64 Identity = 128/191 (67.02%), Postives = 142/191 (74.35%), Query Frame = 3 Query: 48 MPP*NIAVGHPREATHPDALRAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAGG 620 MP IA+G +E HP AL+AA AEF+STLIFVFAG+GSGMAF+KLT G TP+ NISGGHVNPAVTFGAFVGGNI+L RG+LYW+AQLLGSTVAC LL+F T GQ T F L +GV W A+V EIVMTFGLVYTVYATA+DPKKGSLGTIAPIAIGFIV ANIL GG Sbjct: 1 MPINRIALGSHQEVYHPGALKAAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFGL-TGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGG 190
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 5.180e-64 Identity = 125/191 (65.45%), Postives = 142/191 (74.35%), Query Frame = 3 Query: 48 MPP*NIAVGHPREATHPDALRAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAGG 620 MP IA+G P EA+ PDA+RAA AEF S +IFVFAG+GSGMA+ KLT +G TP+ N+SGGHVNPAVTFGAF+GGNI+LLR ILYWIAQLLG+ VACLLLK T G T+AF+LS GV WNAVVFEIVMTFGLVYTVYATA+DPKKG +G IAP+AIG IV ANIL GG Sbjct: 1 MPINRIAIGTPGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGG 191
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 6.332e-62 Identity = 128/191 (67.02%), Postives = 143/191 (74.87%), Query Frame = 3 Query: 48 MPP*NIAVGHPREATHPDALRAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAGG 620 MP NIAVG P+EATHPD L+A LAEF+ST IFVFAG GSG+A+NKLT++GA TP+ NISGGHVNPAVTFGAFVGGNI+LLRGI+Y IAQLLGS VA LL FVT + AF LS GVG A+V EIVMTFGLVYTVYATA+DPKKG++G IAPIAIGFIV ANIL GG Sbjct: 1 MPIRNIAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVT-ASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGG 190
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 1.724e-59 Identity = 126/191 (65.97%), Postives = 141/191 (73.82%), Query Frame = 3 Query: 48 MPP*NIAVGHPREATHPDALRAALAEFLSTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAGG 620 MP NIAVG P+EATHPD L+A LAEF+ST IFVFAG GSG+A+NKLT++GA TP+ NISGGHVNPAV FGAFVGGNI+LLRGI+Y IAQLLGS V LL FVT + AF LS GVG A+V EIVMTFGLVYTVYATA+DPKKG++G IAPIAIGFIV ANIL GG Sbjct: 1 MPIRNIAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVT-ASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGG 189
BLAST of CF834233 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.150e-53 Identity = 106/188 (56.38%), Postives = 127/188 (67.55%), Query Frame = 3 Query: 72 GHPREATHPDALRAALAEFLSTLIFVFAGEGSGMAFNKL-----THNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVRANILAGG 620 G EATHPD++RA LAEFLST +FVFA EGS ++ +KL H G NTP N+SGGHVNPAVTFGA VGG ++ +R I YWIAQLLG+ +ACLLL+ TNG F L+SGVGA N +V EI++TFGLVY VY+T +DPK+GSLG IAP+AIG IV ANIL GG Sbjct: 12 GRADEATHPDSIRATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGG 199 The following BLAST results are available for this feature:
BLAST of CF834233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 104
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834233 ID=CF834233; Name=CF834233; organism=Citrus sinensis; type=EST; length=621bpback to top |