Homology
BLAST of CF834611 vs. ExPASy Swiss-Prot
Match:
RBS_STELP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Stellaria longipes GN=RBCS PE=2 SV=1)
HSP 1 Score: 260.766 bits (665), Expect = 4.530e-69
Identity = 121/166 (72.89%), Postives = 139/166 (83.73%), Query Frame = 2
Query: 2 ANRPFLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGLDNKRQVQCISFIAAKP 499
A R AQASMVAPFTGLKS+++FP ++KTN DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LS E LL EI YL+++GW+PCLEFE E G+VYREH SPGYYDGRYWTMWKLPM+GCTDATQV EV E +K YP + +RIIG DN RQVQCISFIA KP
Sbjct: 12 ATRSNGAQASMVAPFTGLKSNASFPVSRKTNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYPDAHIRIIGFDNVRQVQCISFIAYKP 177
BLAST of CF834611 vs. ExPASy Swiss-Prot
Match:
RBS6_MESCR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-6 PE=3 SV=1)
HSP 1 Score: 260.766 bits (665), Expect = 4.530e-69
Identity = 116/166 (69.88%), Postives = 142/166 (85.54%), Query Frame = 2
Query: 2 ANRPFLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGLDNKRQVQCISFIAAKP 499
A+R AQASMVAPFTGLKS SAFP T+K++ND++++ SNGG+VQCM+VWPP G KKFETLSYLPPLS+E+LLKE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIG DN RQVQC+SFIA KP
Sbjct: 16 ASRSAGAQASMVAPFTGLKSVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWPPLGKKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 181
BLAST of CF834611 vs. ExPASy Swiss-Prot
Match:
RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1)
HSP 1 Score: 260.381 bits (664), Expect = 5.917e-69
Identity = 121/161 (75.16%), Postives = 136/161 (84.47%), Query Frame = 2
Query: 20 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGLDNKRQVQCISFIAAKPP 502
A A VAPFTGLKS + FP T+KTNNDI SIASNGGRVQCM+VWP TG KKFETLSYLP L D L KE+ YL+R GWIPCLEFELE G+VYRE+H+SPGYYDGRYWTMWKLP++GCTDA+QVLKE+ E + YP+ F+RIIG DN RQVQCISFIA KPP
Sbjct: 17 AGAGTVAPFTGLKSMAGFP-TRKTNNDIASIASNGGRVQCMQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPVFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPP 176
BLAST of CF834611 vs. ExPASy Swiss-Prot
Match:
RBS_CUCSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1)
HSP 1 Score: 260.381 bits (664), Expect = 5.917e-69
Identity = 113/160 (70.62%), Postives = 142/160 (88.75%), Query Frame = 2
Query: 20 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGLDNKRQVQCISFIAAKP 499
AQASMVAPFTGLKSS+ FP T+K N DIT++ASN G+VQCMKVWPP GL+KFETLSYLP +S+E L KE +YL+R+GW+PC+EF++ G+VYRE+H+SPG+YDGRYWTMWKLPM+GCTD++QV++E+ E +KEYP +F+R+IG DN RQVQCISFIA KP
Sbjct: 20 AQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCMKVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGFYDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKP 179
BLAST of CF834611 vs. ExPASy Swiss-Prot
Match:
RBS3_MESCR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-3 PE=2 SV=1)
HSP 1 Score: 259.61 bits (662), Expect = 1.009e-68
Identity = 118/160 (73.75%), Postives = 138/160 (86.25%), Query Frame = 2
Query: 20 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGLDNKRQVQCISFIAAKP 499
AQA+MVAPF GLKS SAFP T+K NNDITS+ASNGGRVQCM+VWPP G KKFETLSYLPPLS+E+L+KE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIG DN RQVQCISFIA KP
Sbjct: 20 AQANMVAPFNGLKSVSAFPVTRK-NNDITSVASNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKP 178
BLAST of CF834611 vs. ExPASy Swiss-Prot
Match:
RBS1_MESCR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-1 PE=2 SV=2)
HSP 1 Score: 259.61 bits (662), Expect = 1.009e-68
Identity = 118/160 (73.75%), Postives = 138/160 (86.25%), Query Frame = 2
Query: 20 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGLDNKRQVQCISFIAAKP 499
AQASMVAPF GLKS +AFP TKK NNDITS+A+NGGRVQCM+VWPP G KKFETLSYLPPLS+E+L+KE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIG DN RQVQCISFIA KP
Sbjct: 19 AQASMVAPFNGLKSVAAFPVTKK-NNDITSVATNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKP 177
BLAST of CF834611 vs. ExPASy Swiss-Prot
Match:
RBS_GOSHI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Gossypium hirsutum GN=RBCS PE=3 SV=2)
HSP 1 Score: 258.455 bits (659), Expect = 2.248e-68
Identity = 118/162 (72.84%), Postives = 140/162 (86.42%), Query Frame = 2
Query: 20 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGLDNKRQVQCISFIAAKPPG 505
AQA+MVAPFTGLKS+SAFP T+K NNDITS+ASNGGRVQCM+VWPP G KKFETLSYLP L+ L KE++YL+RS WIPCLEFELE+G+V+R++ P YYDGRYWTMWKLPM+GCTD+ QVL+E+ +KEYP++F+RIIG DN RQVQCISFIA KP G
Sbjct: 20 AQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPKG 181
BLAST of CF834611 vs. ExPASy Swiss-Prot
Match:
RBS2_AMAHP (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS2 PE=2 SV=1)
HSP 1 Score: 258.455 bits (659), Expect = 2.248e-68
Identity = 119/160 (74.38%), Postives = 136/160 (85.00%), Query Frame = 2
Query: 20 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGLDNKRQVQCISFIAAKP 499
AQA+MVAPF GLKS ++FP T+K+N DITSIASNGGRVQCM+VWPP G KKFETLSYLPPLSD LL ++ YL+ GWIPC+EFELE +VYRE+H+SPGY DGRYWTMWKLPMYGCTD QVL EV E +K YP +F+RIIG DNKRQVQC+SFIA KP
Sbjct: 22 AQANMVAPFNGLKSIASFPVTRKSN-DITSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPTAFIRIIGFDNKRQVQCVSFIAYKP 180
BLAST of CF834611 vs. ExPASy Swiss-Prot
Match:
RBS_HELAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1)
HSP 1 Score: 258.07 bits (658), Expect = 2.936e-68
Identity = 115/162 (70.99%), Postives = 141/162 (87.04%), Query Frame = 2
Query: 20 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGLDNKRQVQCISFIAAKPPG 505
AQA+MVAPFTGLKS++AFP TKK N D +++ SNGGRVQCMKVWPP GLKK+ETLSYLPPL++ L KE++YL+R W+PCLEFELE G+VYRE+ +SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIG DN RQVQCI FIA++P G
Sbjct: 17 AQANMVAPFTGLKSNAAFPTTKKAN-DFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASRPDG 177
BLAST of CF834611 vs. ExPASy Swiss-Prot
Match:
RBS5_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1)
HSP 1 Score: 257.684 bits (657), Expect = 3.835e-68
Identity = 118/160 (73.75%), Postives = 138/160 (86.25%), Query Frame = 2
Query: 20 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGLDNKRQVQCISFIAAKP 499
AQ+SMVAPF GL+SS AFPAT+K NND++++ SNGGRV CM+VWPP GLKKFETLSYLPPLS E L KE++YL+R+ W+PC+EF E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDA+QV+ EV E +K YP FVRIIG DNKRQVQCISFIA KP
Sbjct: 18 AQSSMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
The following BLAST results are available for this feature:
BLAST of CF834611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 128
50 100 150 200 250 300 350 400 450 500 550 600 650 Expect = 4.53e-69 / Id = 72.89 Expect = 4.53e-69 / Id = 69.88 Expect = 5.92e-69 / Id = 75.16 Expect = 5.92e-69 / Id = 70.63 Expect = 1.01e-68 / Id = 73.75 Expect = 1.01e-68 / Id = 73.75 Expect = 2.25e-68 / Id = 72.84 Expect = 2.25e-68 / Id = 74.38 Expect = 2.94e-68 / Id = 70.99 Expect = 3.83e-68 / Id = 73.75 Sequence RBS_STELP RBS6_MESCR RBS_GLYTO RBS_CUCSA RBS3_MESCR RBS1_MESCR RBS_GOSHI RBS2_AMAHP RBS_HELAN RBS5_LEMGI
Match Name E-value Identity Description
RBS_STELP 4.530e-69 72.89 Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS6_MESCR 4.530e-69 69.88 Ribulose bisphosphate carboxylase small chain 6, c... [more]
RBS_GLYTO 5.917e-69 75.16 Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_CUCSA 5.917e-69 70.63 Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS3_MESCR 1.009e-68 73.75 Ribulose bisphosphate carboxylase small chain 3, c... [more]
RBS1_MESCR 1.009e-68 73.75 Ribulose bisphosphate carboxylase small chain 1, c... [more]
RBS_GOSHI 2.248e-68 72.84 Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS2_AMAHP 2.248e-68 74.38 Ribulose bisphosphate carboxylase small chain 2, c... [more]
RBS_HELAN 2.936e-68 70.99 Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS5_LEMGI 3.835e-68 73.75 Ribulose bisphosphate carboxylase small chain SSU5... [more]
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