CF834862 | Citrus Genome Database

Homology

BLAST of CF834862 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.347e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = -1

Query:  183 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 278
            FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CF834862 vs. ExPASy Swiss-Prot
Match: UBIQ_WHEAT (Ubiquitin OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.347e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = -1

Query:  183 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 278
            FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CF834862 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYCR (Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.347e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = -1

Query:  183 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 278
            FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CF834862 vs. ExPASy Swiss-Prot
Match: UBIQ_SOYBN (Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.347e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = -1

Query:  183 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 278
            FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CF834862 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLTU (Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.347e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = -1

Query:  183 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 278
            FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CF834862 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLLC (Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.347e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = -1

Query:  183 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 278
            FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CF834862 vs. ExPASy Swiss-Prot
Match: UBIQ_PETCR (Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.347e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = -1

Query:  183 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 278
            FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CF834862 vs. ExPASy Swiss-Prot
Match: UBIQ_PEA (Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.347e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = -1

Query:  183 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 278
            FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CF834862 vs. ExPASy Swiss-Prot
Match: UBIQ_ORYSJ (Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.347e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = -1

Query:  183 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 278
            FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CF834862 vs. ExPASy Swiss-Prot
Match: UBIQ_NICSY (Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.347e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = -1

Query:  183 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 278
            FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of CF834862 vs. ExPASy Swiss-Prot

BLAST of CF834862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
UBL1_ORYSJ	3.347e-11	100.00	Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja...	[more]
UBIQ_WHEAT	3.347e-11	100.00	Ubiquitin OS=Triticum aestivum PE=3 SV=1	[more]
UBIQ_TRYCR	3.347e-11	100.00	Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1	[more]
UBIQ_SOYBN	3.347e-11	100.00	Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1	[more]
UBIQ_SOLTU	3.347e-11	100.00	Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1	[more]
UBIQ_SOLLC	3.347e-11	100.00	Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=...	[more]
UBIQ_PETCR	3.347e-11	100.00	Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3...	[more]
UBIQ_PEA	3.347e-11	100.00	Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1	[more]
UBIQ_ORYSJ	3.347e-11	100.00	Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 ...	[more]
UBIQ_NICSY	3.347e-11	100.00	Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE...	[more]

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Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF834862 ID=CF834862; Name=CF834862; organism=Citrus sinensis; type=EST; length=278bp
TAGATATTATAATGGGACGTTAGTGGGACCATATCAATATCTTAGAAACA
GAGTTCAACTACCACAAACCAAAATAAACTTCAAATAGTTATTTAAGCTA
TTTCACCAATAGCCAGCAAACATTAACCAAGACAAACCGAAGCAAATAAG
ACACACACACACCCAGATGACCAAACTCAGAAACCTCCACGGAGTCGGAG
CACAAGATGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCC
TTCCATCCTCAAGTTGTTTTCCAGCAAA