CF835413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: DNM1L_MOUSE (Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.337e-44 Identity = 100/231 (43.29%), Postives = 139/231 (60.17%), Query Frame = 2 Query: 140 MTSLIGLINKIQRACTVLGDHGGEGMSLWEALPXXXXXXXXXXXXXXXLESVVGRDFLPRGSGIVTRRPLVLQL--------HQTEG------------GTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 M +LI +INK+Q +G + LP LES+VGRD LPRG+G+VTRRPL+LQL +T G ++ +FLH K +TDF +R+EI +ET+RI+G +K +S PI L ++SPNVVNLTL+DLPG+TKV V QP+ I I ++ ++ P+ IILA++ AN D+ATS+A+K++REVDP G RT V+TKLD Sbjct: 1 MEALIPVINKLQDVFNTVGADIIQ-------LPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQLVHVSPEDKRKTTGEENGKFQSWRVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLD 224
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: DNM1L_BOVIN (Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.987e-44 Identity = 102/238 (42.86%), Postives = 140/238 (58.82%), Query Frame = 2 Query: 140 MTSLIGLINKIQRACTVLGDHGGEGMSLWEALPXXXXXXXXXXXXXXXLESVVGRDFLPRGSGIVTRRPLVLQL-------------------------HQTEG--GTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 M +LI +INK+Q +G + LP LES+VGRD LPRG+GIVTRRPL+LQL H ++G ++ +FLH K +TDF +R+EI +ET+RI+G +K +S PI L I+SPNVVNLTL+DLPG+TKV V QP+ I I ++ ++ P+ IILA++ AN D+ATS+A+K++REVDP G RT V+TKLD Sbjct: 1 MEALIPVINKLQDVFNTVGADIIQ-------LPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVAPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLD 231
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: DNM1L_RAT (Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm1l PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.800e-44 Identity = 100/238 (42.02%), Postives = 140/238 (58.82%), Query Frame = 2 Query: 140 MTSLIGLINKIQRACTVLGDHGGEGMSLWEALPXXXXXXXXXXXXXXXLESVVGRDFLPRGSGIVTRRPLVLQL-------------------------HQTEG--GTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 M +LI +INK+Q +G + LP LES+VGRD LPRG+G+VTRRPL+LQL H ++G ++ +FLH K +TDF +R+EI +ET+RI+G +K +S PI L ++SPNVVNLTL+DLPG+TKV V QP+ I I ++ ++ P+ IILA++ AN D+ATS+A+K++REVDP G RT V+TKLD Sbjct: 1 MEALIPVINKLQDVFNTVGADIIQ-------LPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQLVHVSPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLD 231
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX_PERFL (Interferon-induced GTP-binding protein Mx (Fragment) OS=Perca fluviatilis GN=mx PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.269e-31 Identity = 73/156 (46.79%), Postives = 106/156 (67.95%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTD-YAEFLHAP-RKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PL L++ + + G + Y + + K+ D A V K+I D D + G IS+ I L I SP+V +LTLIDLPG+ +VAV+GQPE+I + I+ +++ ++++ I L + P N DIAT++A+K+A+EVDP GERT G+LTK D Sbjct: 60 LPRGSGIVTRCPLELKMKRRQEGEEWYGKISYQDCEKEIEDPADVEKKIRDAQDEMAGVGVGISDDLISLEIASPDVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQKFIKRQETISLVVVPCNVDIATTEALKMAQEVDPDGERTLGILTKPD 215
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX_ONCMY (Interferon-induced GTP-binding protein Mx OS=Oncorhynchus mykiss GN=mx PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.921e-30 Identity = 72/156 (46.15%), Postives = 104/156 (66.67%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAP--RKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PL L++ + + G ++ + ++ D + V K+I + D + G IS+ I L I SP+V +LTLIDLPG+ +VAV+GQPE+I E I+ ++R ++ K I L + P N DIAT++A+K+A+EVDP GERT G+LTK D Sbjct: 59 LPRGSGIVTRCPLELKMKRKKEGEEWHGKISYQDHEEEIEDPSDVEKKIREAQDEMAGVGVGISDDLISLEIGSPDVPDLTLIDLPGIARVAVKGQPENIGEQIKRLIRKFIMKQETISLVVVPCNVDIATTEALKMAQEVDPEGERTLGILTKPD 214
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_SHEEP (Interferon-induced GTP-binding protein Mx1 OS=Ovis aries GN=MX1 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.245e-29 Identity = 73/157 (46.50%), Postives = 104/157 (66.24%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDY---AEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + E ++ FL + +D + V KEIS+ I G+ IS+ I L + SP+V +LTLIDLPG+T+VAV QP I I++++R Y+ + I L + PAN DIAT++A+++A++VDP G+RT G+LTK D Sbjct: 90 LPRGSGIVTRCPLVLRLKKLEKEGEWKGKVSFLDR-EIEISDASQVEKEISEAQIAIAGEGMGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPHDIEYQIKSLIRKYILRQETINLVVVPANVDIATTEALRMAQDVDPQGDRTIGILTKPD 245
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX_DICLA (Interferon-induced GTP-binding protein Mx OS=Dicentrarchus labrax GN=mx PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 2.124e-29 Identity = 71/156 (45.51%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQL-HQTEGGTDYAEFLHAP-RKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PL L++ + EG Y + + + D A V K+I + ++I G IS I L I SP+V +LTLIDLPG+ +VAV+GQPE+I + I+ +++ ++ K I L + P N DIAT++A+ +A+ VDP GERT G+LTK D Sbjct: 58 LPRGSGIVTRCPLELKMKRKNEGEEWYGKITYIGFEENIKDPADVEKKIREAQNKIAGPGSGISEDLISLEIASPDVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQKFITKQETISLVVVPCNVDIATTEALNMAQRVDPDGERTLGILTKPD 213
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX_EPICO (Interferon-induced GTP-binding protein Mx OS=Epinephelus coioides GN=mx PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.623e-29 Identity = 69/156 (44.23%), Postives = 102/156 (65.38%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFL--HAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PL L++ + + G ++ + K+ D + V +I + D + G IS+ I L I SP+V +LTLIDLPG+ +VAV+GQPE I + I+ +++ ++ + I L + P N DIAT++A+K+A+EVDP GERT G+LTK D Sbjct: 58 LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYRGCEKELEDPSDVENKIREAQDEMAGVGVGISDDLISLEIASPDVPDLTLIDLPGIARVAVKGQPEDIGKQIKGLIQRFITRQETISLVVVPCNVDIATTEALKMAQEVDPDGERTLGILTKPD 213
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_RAT (Interferon-induced GTP-binding protein Mx1 OS=Rattus norvegicus GN=Mx1 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.623e-29 Identity = 70/156 (44.87%), Postives = 106/156 (67.95%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYA-EFLHAPRK-KFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L Q + G ++ + ++ + + + + V +EI+ + I G+ +IS+ I L + SP+V +LTLIDLPG+T+VAV QP I I+ ++ Y++K I L + P+N DIAT++A+K+A+EVDP G+RT G+LTK D Sbjct: 86 LPRGSGIVTRCPLVLKLKQLKQGEKWSGKVIYKDTEIEISHPSLVEREINKAQNLIAGEGLKISSDLISLEVSSPHVPDLTLIDLPGITRVAVGDQPADIEHKIKRLITEYIQKQETINLVVVPSNVDIATTEALKMAQEVDPQGDRTIGILTKPD 241
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_BOVIN (Interferon-induced GTP-binding protein Mx1 OS=Bos taurus GN=MX1 PE=2 SV=4) HSP 1 Score: 128.642 bits (322), Expect = 3.623e-29 Identity = 72/156 (46.15%), Postives = 102/156 (65.38%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRKKFT--DFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + ++ + K+ D + V KEIS+ I G+ IS+ I L + SP+V +LTLIDLPG+T+VAV QP I I++++R Y+ + I L + PAN DIAT++A+++A+EVDP G+RT G+LTK D Sbjct: 84 LPRGSGIVTRCPLVLRLKKLGNEDEWKGKVSFLDKEIEIPDASQVEKEISEAQIAIAGEGTGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPPDIEYQIKSLIRKYILRQETINLVVVPANVDIATTEALRMAQEVDPQGDRTIGILTKPD 239 The following BLAST results are available for this feature:
BLAST of CF835413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835413 ID=CF835413; Name=CF835413; organism=Citrus sinensis; type=EST; length=773bpback to top |