CF835413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: DRP1C_ARATH (Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2) HSP 1 Score: 360.147 bits (923), Expect = 7.398e-99 Identity = 186/215 (86.51%), Postives = 194/215 (90.23%), Query Frame = 2 Query: 131 MATMTSLIGLINKIQRACTVLGDHGGEGMSLWEALPXXXXXXXXXXXXXXXLESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGT-DYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 MATM SLIGLINKIQRACTVLGDHGGEGMSLWEALP LESVVGRDFLPRGSGIVTRRPLVLQLH+TE GT +YAEFLHAP+K+F DFAAVRKEI DETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAV+GQPESIV+DIENMVRSYVEKP+CIILAISPANQDIATSDAIKLAREVDP+GERTFGV TKLD Sbjct: 1 MATMKSLIGLINKIQRACTVLGDHGGEGMSLWEALPTVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGTTEYAEFLHAPKKRFADFAAVRKEIEDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLAREVDPTGERTFGVATKLD 215
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: DRP1E_ARATH (Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 7.673e-88 Identity = 167/220 (75.91%), Postives = 187/220 (85.00%), Query Frame = 2 Query: 131 MATMTSLIGLINKIQRACTVLGDHGGEG-----MSLWEALPXXXXXXXXXXXXXXXLESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGTD-YAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 M TM SLIGL+N+IQRACTVLGD+GG SLWEALP LES+VGRDFLPRGSGIVTRRPLVLQLH+T+ GT+ YAEFLH P+K+FTDFA VR+EI DETDRITGK+KQIS +PI LSIYSPNVVNLTLIDLPGLTKVAVEGQPE+I EDIE+MVR+YV+KP+CIILAISPANQDIATSDAIKLA++VDP+GERTFGVLTKLD Sbjct: 1 MTTMESLIGLVNRIQRACTVLGDYGGGTGSNAFNSLWEALPTVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTDDGTEEYAEFLHLPKKQFTDFALVRREIQDETDRITGKNKQISPVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPETIAEDIESMVRTYVDKPNCIILAISPANQDIATSDAIKLAKDVDPTGERTFGVLTKLD 220
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: DRP1D_ARATH (Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2) HSP 1 Score: 316.235 bits (809), Expect = 1.225e-85 Identity = 166/215 (77.21%), Postives = 182/215 (84.65%), Query Frame = 2 Query: 140 MTSLIGLINKIQRACTVLGDHGGEG---MSLWEALPXXXXXXXXXXXXXXXLESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGT-DYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 M SLI LIN IQRACTV+GDHGG+ SLWEALP LES+VGRDFLPRGSGIVTRRPLVLQLH+TE GT D AEFLH KKFT+F+ VRKEI DETDRITGK+KQIS+IPI LSI+SPNVVNLTLIDLPGLTKVAVEGQPE+IVEDIE+MVRSYVEKP+C+ILAISPANQDIATSDA+KLA+EVDP G+RTFGVLTKLD Sbjct: 1 MESLIVLINTIQRACTVVGDHGGDSNALSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTENGTEDNAEFLHLTNKKFTNFSLVRKEIEDETDRITGKNKQISSIPIHLSIFSPNVVNLTLIDLPGLTKVAVEGQPETIVEDIESMVRSYVEKPNCLILAISPANQDIATSDAMKLAKEVDPIGDRTFGVLTKLD 215
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: DRP1A_ARATH (Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3) HSP 1 Score: 308.916 bits (790), Expect = 1.956e-83 Identity = 157/214 (73.36%), Postives = 180/214 (84.11%), Query Frame = 2 Query: 140 MTSLIGLINKIQRACTVLGDHGGEGM--SLWEALPXXXXXXXXXXXXXXXLESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGT-DYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 M +LI L+NKIQRACT LGDHG +LW++LP LES+VG+DFLPRGSGIVTRRPLVLQL + + GT +YAEFLH PRKKFTDFAAVRKEI DETDR TG+SK IS++PI LSIYSPNVVNLTLIDLPGLTKVAV+GQ +SIV+DIENMVRSY+EKP+CIILAISPANQD+ATSDAIK++REVDPSG+RTFGVLTK+D Sbjct: 1 MENLISLVNKIQRACTALGDHGDSSALPTLWDSLPAIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLQKIDDGTREYAEFLHLPRKKFTDFAAVRKEIQDETDRETGRSKAISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVDGQSDSIVKDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPSGDRTFGVLTKID 214
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: SDLCA_SOYBN (Dynamin-related protein 12A OS=Glycine max PE=1 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.554e-83 Identity = 156/214 (72.90%), Postives = 180/214 (84.11%), Query Frame = 2 Query: 140 MTSLIGLINKIQRACTVLGDHGGEGM--SLWEALPXXXXXXXXXXXXXXXLESVVGRDFLPRGSGIVTRRPLVLQLHQT-EGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 M +LI L+NKIQRACT LGDHG +LW++LP LESVVG+DFLPRGSGIVTRRPLVLQLH+ EG +YAEFLH PRK+FTDF AVRKEI DETDR TG++KQIS++PI LSIYSPNVVNLTLIDLPGLTKVAVEGQP+SIV+DIE+MVRSY+EKP+CIILAISPANQD+ATSDAIK++REVDP+G+RT GVLTK+D Sbjct: 1 MENLISLVNKIQRACTALGDHGENSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIDEGSREYAEFLHLPRKRFTDFVAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVKDIEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGDRTIGVLTKID 214
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: SDL5A_SOYBN (Dynamin-related protein 5A OS=Glycine max PE=2 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 4.357e-83 Identity = 155/214 (72.43%), Postives = 180/214 (84.11%), Query Frame = 2 Query: 140 MTSLIGLINKIQRACTVLGDHGGEGM--SLWEALPXXXXXXXXXXXXXXXLESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGT-DYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 M +LI L+NKIQRACT LGDHG +LW++LP LESVVG+DFLPRGSGIVTRRPLVLQLH+ E G+ +YAEFLH PRK+FTDF AVRKEI DETDR TG++KQIS +PI LSIYSPNVVNLTL+DLPGLTKVAVEGQP+SIV+DIE+MVRSY+EKP+CIILAISPANQD+ATSDAIK++REVDP+G+RT GVLTK+D Sbjct: 1 MENLISLVNKIQRACTALGDHGENSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIEEGSREYAEFLHLPRKRFTDFVAVRKEIQDETDRETGRTKQISTVPIHLSIYSPNVVNLTLVDLPGLTKVAVEGQPDSIVKDIEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGDRTIGVLTKID 214
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: DRP1B_ARATH (Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 5.690e-83 Identity = 157/215 (73.02%), Postives = 182/215 (84.65%), Query Frame = 2 Query: 140 MTSLIGLINKIQRACTVLGDHGGEGMSL---WEALPXXXXXXXXXXXXXXXLESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKS-KQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 M SLI L+NKIQRACT LGDHG EG SL W++LP LESVVG+DFLPRG+GIVTRRPLVLQLH+ + G +YAEF+H P+KKFTDFAAVR+EISDETDR TG+S K IS +PI LSI+SPNVVNLTL+DLPGLTKVAV+GQPESIV+DIENMVRS++EKP+CIILAISPANQD+ATSDAIK++REVDP G+RTFGVLTK+D Sbjct: 1 MESLIALVNKIQRACTALGDHG-EGSSLPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGAGIVTRRPLVLQLHRIDEGKEYAEFMHLPKKKFTDFAAVRQEISDETDRETGRSSKVISTVPIHLSIFSPNVVNLTLVDLPGLTKVAVDGQPESIVQDIENMVRSFIEKPNCIILAISPANQDLATSDAIKISREVDPKGDRTFGVLTKID 214
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: DYN_DROME (Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 6.335e-58 Identity = 120/211 (56.87%), Postives = 148/211 (70.14%), Query Frame = 2 Query: 140 MTSLIGLINKIQRACTVLGDHGGEGMSLWEALPXXXXXXXXXXXXXXXLESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 M SLI ++NK+Q A T LG H M L LP LE+ VG+DFLPRGSGIVTRRPL+LQL G T+Y EFLH KKF+ F +RKEI DETDR+TG +K ISNIPI L +YSP+V+NLTLIDLPGLTKVA+ QP I + I+ M+ ++ K +C+ILA++PAN D+A SDA+KLA+EVDP G RT GV+TKLD Sbjct: 1 MDSLITIVNKLQDAFTSLGVH----MQL--DLPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLILQL--INGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIRKETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVITKLD 203
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: DYN1_CAEEL (Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV=3) HSP 1 Score: 215.312 bits (547), Expect = 2.943e-55 Identity = 116/211 (54.98%), Postives = 147/211 (69.67%), Query Frame = 2 Query: 140 MTSLIGLINKIQRACTVLGDHGGEGMSLWEALPXXXXXXXXXXXXXXXLESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 M +LI +IN++Q A + LG S+ LP LE+ VG+DFLPRGSGIVTRRPL+LQL Q +YAEFLH +F DF AVRKEI DETDR+TG++K IS PI L ++SPNV+NLTLIDLPGLTKV V QP I + I +M+ +++ + +C+ILA++PAN D+ATSDA+KLA+EVDP G RT GVLTKLD Sbjct: 8 MQALIPVINRVQDAFSQLGT------SVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLILQLIQDRN--EYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINLRVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINRETCLILAVTPANSDLATSDALKLAKEVDPQGLRTIGVLTKLD 210
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: DYN1_RAT (Dynamin-1 OS=Rattus norvegicus GN=Dnm1 PE=1 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 8.563e-55 Identity = 114/211 (54.03%), Postives = 142/211 (67.30%), Query Frame = 2 Query: 140 MTSLIGLINKIQRACTVLGDHGGEGMSLWEALPXXXXXXXXXXXXXXXLESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 M LI L+N++Q A + +G + LP LE+ VGRDFLPRGSGIVTRRPLVLQL T+YAEFLH KKFTDF VR EI ETDR+TG +K IS +PI L +YSP+V+NLTL+DLPG+TKV V QP I I +M+ +V K +C+ILA+SPAN D+A SDA+K+A+EVDP G+RT GV+TKLD Sbjct: 6 MEDLIPLVNRLQDAFSAIGQNADLD------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL--VNSTTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKIAKEVDPQGQRTIGVITKLD 208 The following BLAST results are available for this feature:
BLAST of CF835413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835413 ID=CF835413; Name=CF835413; organism=Citrus sinensis; type=EST; length=773bpback to top |