CF835413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX_SINCH (Interferon-induced GTP-binding protein Mx OS=Siniperca chuatsi GN=mx PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.731e-29 Identity = 70/156 (44.87%), Postives = 103/156 (66.03%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTD-YAEFLHAPRKK-FTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PL L++ + + G + Y + + ++ D A V K+I + D + G IS+ I L I SP V +LTLIDLPG+ +VAV+GQPE+I + I+ ++++++ K I L + P N DIAT++A+ +A+ VDP GERT G+LTK D Sbjct: 58 LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYQNHEEEIEDPADVEKKIREAQDEMAGVGVGISDDLISLEIGSPGVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQTFITKQETISLVVVPCNVDIATTEALNMAQRVDPDGERTLGILTKPD 213
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX2_CANFA (Interferon-induced GTP-binding protein Mx2 OS=Canis familiaris GN=MX2 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.070e-29 Identity = 74/159 (46.54%), Postives = 101/159 (63.52%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQT-----EGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + G Y + +F D + V KEI + I G+ IS+ I L I SP V +LTLIDLPG+T+VAV QP+ I I+ ++++Y++K I L + P N DIAT++A+ +A+EVDP+G+RT GVLTK D Sbjct: 143 LPRGSGIVTRCPLVLKLKRDPHKAWRGRISYRK----TELQFQDPSQVEKEIRQAQNIIAGQGLGISHELISLEITSPEVPDLTLIDLPGITRVAVGNQPQDIGVQIKALIKNYIQKQETINLVVVPCNVDIATTEALSMAQEVDPNGDRTIGVLTKPD 297
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_PHOVI (Interferon-induced GTP-binding protein Mx1 OS=Phoca vitulina GN=MX1 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.070e-29 Identity = 73/160 (45.62%), Postives = 100/160 (62.50%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQT------EGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + G Y +F + +D + V EIS + I G+ + IS+ I L + SP+V +LTLIDLPG+T+VAV QP I + ++R Y+ K I L + P N DIAT++A+ +A+EVDPSG+RT G+LTK D Sbjct: 93 LPRGSGIVTRCPLVLKLKKLLNEDEWRGKVSYQDF----EMEISDPSEVEVEISKAQNVIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQTKQLIRKYILKQETINLVVVPCNVDIATTEALSMAQEVDPSGDRTIGILTKPD 248
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_MOUSE (Interferon-induced GTP-binding protein Mx1 OS=Mus musculus GN=Mx1 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28 Identity = 70/156 (44.87%), Postives = 102/156 (65.38%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAP--RKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + + G ++ + + +D + V + I+ + I G IS+ I L + SPNV +LTLIDLPG+T+VAV QP I I+ ++++Y++K I L + P+N DIAT++A+ +A+EVDP G+RT GVLTK D Sbjct: 61 LPRGSGIVTRCPLVLKLRKLKEGEEWRGKVSYDDIEVELSDPSEVEEAINKGQNFIAGVGLGISDKLISLDVSSPNVPDLTLIDLPGITRVAVGNQPADIGRQIKRLIKTYIQKQETINLVVVPSNVDIATTEALSMAQEVDPEGDRTIGVLTKPD 216
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_ICTPU (Interferon-induced GTP-binding protein Mx1 OS=Ictalurus punctatus GN=mx1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28 Identity = 72/168 (42.86%), Postives = 104/168 (61.90%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQL--------------HQTEGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PL L++ ++ + DY E + P A V K+I + D + G IS+ I L + S +V +LTLIDLPG+ +VAV+GQPE+I E I+ +++ ++ K I L + P+N DIAT++A+K+A+EVDP+GERT G+LTK D Sbjct: 59 LPRGSGIVTRCPLELKMKRSREEDFWHGKIKYKKDHDEDYEEEIQNP-------ADVEKKIREAQDHMAGVGVGISDELISLEVTSADVPDLTLIDLPGIARVAVKGQPENIGEQIKRLIKKFITKQETINLVVVPSNVDIATTEALKMAQEVDPNGERTLGILTKPD 219
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX2_MOUSE (Interferon-induced GTP-binding protein Mx2 OS=Mus musculus GN=Mx2 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28 Identity = 69/156 (44.23%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAP--RKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + G ++ + + +D + V + I+ + I G IS+ I L + SPNV +LTLIDLPG+T+VAV QP I I+ ++++Y++K I L + P+N DIAT++A+ +A+EVDP G+RT G+LTK D Sbjct: 88 LPRGSGIVTRCPLVLKLRKLNEGEEWRGKVSYDDIEVELSDPSEVEEAINKGQNFIAGVGLGISDKLISLDVSSPNVPDLTLIDLPGITRVAVGNQPADIGRQIKRLIKTYIQKQETINLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPD 243
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX_LARCR (Interferon-induced GTP-binding protein Mx OS=Larimichthys crocea GN=mx PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.067e-28 Identity = 70/163 (42.94%), Postives = 103/163 (63.19%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGT---------DYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PL L++ + + G DY E + P A V K+I + D++ G +I++ I L I SP+V +LTLI LPG+ +VAV+ QPE+I + I+ +++ +++K I L + P N DIAT++A+K+A+EVDP GERT +LTK D Sbjct: 58 LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYQDYEEEIEVP-------ADVEKKIREAQDKMAGNGVEIADDLISLEIASPDVPDLTLIALPGIARVAVKKQPENIGDQIKRLIQKFIKKQETINLVVVPCNMDIATTEALKMAQEVDPDGERTLVILTKPD 213
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX2_PIG (Interferon-induced GTP-binding protein Mx2 OS=Sus scrofa GN=MX2 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.005e-28 Identity = 68/154 (44.16%), Postives = 95/154 (61.69%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGI+TR PL L+L + E + D + V +EI D I G IS+ I L + SP V +LTLIDLPG+T+VAV QP+ I I+ ++R Y+++ I L + P N DIAT++A+++A+EVDP G+RT G+LTK D Sbjct: 140 LPRGSGIITRCPLALRLKKKECPWQGRISYRKVELQLQDPSQVEREIRKAQDAIAGSGVGISHELISLEVTSPEVPDLTLIDLPGITRVAVGNQPQDIGLQIKALIRKYIQEQQTINLVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPD 293
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_CANFA (Interferon-induced GTP-binding protein Mx1 OS=Canis familiaris GN=MX1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.231e-28 Identity = 71/160 (44.38%), Postives = 98/160 (61.25%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQT------EGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + G Y + + +D + V EI+ D I G+ + IS+ I L + SP+V +LTLIDLPG+T+VAV QP I + ++R Y+ K I L + P N DIAT++A+ +A+EVDP G+RT G+LTK D Sbjct: 91 LPRGSGIVTRCPLVLKLKKLINEDEWRGKVSYQD----TEMEISDPSEVEVEINKAQDAIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQTKQLIRKYILKQETINLVVVPCNVDIATTEALSMAQEVDPDGDRTIGILTKPD 246
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX2_ICTPU (Interferon-induced GTP-binding protein Mx2 OS=Ictalurus punctatus GN=mx2 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.832e-28 Identity = 72/160 (45.00%), Postives = 101/160 (63.12%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRK------KFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PL L++ ++ A+F H K + D A V + I + I G IS+ I L + S NV +LT+IDLPG+T+VAV+ QPE+I + + +++ ++ K I L + P N DIAT++A+K+A EVDP+GERTFGVLTK D Sbjct: 57 LPRGSGIVTRCPLELKMKKSRK----ADFWHGKIKYEDYEEEIEDPADVEQMIRKAQNEIAGTGMGISDKLISLEVTSSNVPDLTVIDLPGITRVAVKDQPENIGDQSKRLIKKFITKQETINLVVVPCNVDIATTEALKMALEVDPNGERTFGVLTKPD 212 The following BLAST results are available for this feature:
BLAST of CF835413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835413 ID=CF835413; Name=CF835413; organism=Citrus sinensis; type=EST; length=773bpback to top |