CF835413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_PIG (Interferon-induced GTP-binding protein Mx1 OS=Sus scrofa GN=MX1 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.832e-28 Identity = 71/157 (45.22%), Postives = 101/157 (64.33%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRK---KFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + D + + R + +D + V KE+S I G+ IS+ I L + SP+V +LTLIDLPG+T+VAV QP I I+++++ Y+ K I L + P N DIAT++A+++A+EVDP G+RT G+LTK D Sbjct: 95 LPRGSGIVTRCPLVLKLKKLVNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPD 251
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_OTABY (Interferon-induced GTP-binding protein Mx1 OS=Otaria byronia GN=MX1 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.832e-28 Identity = 70/160 (43.75%), Postives = 99/160 (61.88%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQT------EGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + G Y +F + +D + V EI+ + I G+ + IS+ I L + SP+V +LTLIDLPG+T+VAV QP I + +++ Y+ K I L + P N DIAT++A+ +A+EVDP G+RT G+LTK D Sbjct: 93 LPRGSGIVTRCPLVLKLKKLLNKDEWRGKVSYQDF----EMEISDPSEVEVEINKAQNAIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGHQTKKLIKKYILKQETINLVVVPCNVDIATTEALSMAQEVDPDGDRTIGILTKPD 248
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MXB_DANRE (Interferon-induced GTP-binding protein MxB OS=Danio rerio GN=mxb PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 8.923e-28 Identity = 71/160 (44.38%), Postives = 99/160 (61.88%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTE------GGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PL L++ +++ G Y + F D A V K+I + D + G IS I L I S NV +LTLIDLPG+ +VAV+GQPE+I + I+ ++R ++ K I L + P N DIAT++A+++A+ DP GERT G+LTK D Sbjct: 62 LPRGSGIVTRCPLELKMIRSKEDEKWHGRISYQNH----EEDFDDPAEVEKKIREAQDEMAGAGVGISEELISLQITSANVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIRMFITKQETINLVVVPCNVDIATTEALQMAQAEDPEGERTLGILTKPD 217
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX2_SHEEP (Interferon-induced GTP-binding protein Mx2 OS=Ovis aries GN=MX2 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.923e-28 Identity = 72/161 (44.72%), Postives = 101/161 (62.73%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTE----GGTDY---AEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGI+TR PLVL+L + E G Y + LH P + V +EI + I G IS+ I L + SP V +LTLIDLPG+T+VAVE QP+ I I+ ++++Y+++ I L + P N DIAT++A+ +A+EVDP G+RT G+LTK D Sbjct: 143 LPRGSGIITRCPLVLKLTKRECEWTGKITYRNVTQQLHNPSE-------VEREIRRAQNIIAGNGVGISHELINLEVTSPEVPDLTLIDLPGITRVAVENQPQDIGLQIKALIKTYIQRQETINLVVVPCNVDIATTEALSMAQEVDPDGDRTIGILTKPD 296
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_PONAB (Interferon-induced GTP-binding protein Mx1 OS=Pongo abelii GN=MX1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.923e-28 Identity = 70/160 (43.75%), Postives = 101/160 (63.12%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQT------EGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + G Y ++ + +D + V KEI+ + I G+ IS+ I L I S +V +LTLIDLPG+T+VAV QP I I+ +++ Y+++ I L + P+N DIAT++A+ +A+EVDP G+RT G+LTK D Sbjct: 95 LPRGSGIVTRCPLVLKLKKLVNEDKWRGKVSYQDY----EIEISDASEVEKEINKAQNTIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPD 250
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_MACMU (Interferon-induced GTP-binding protein Mx1 OS=Macaca mulatta GN=MX1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.923e-28 Identity = 71/160 (44.38%), Postives = 100/160 (62.50%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQT------EGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + G Y ++ + D + V KEI+ + I G+ IS+ I L I S +V +LTLIDLPG+T+VAV QP I I+ ++R Y+++ I L + P+N DIAT++A+ +A+EVDP G+RT G+LTK D Sbjct: 95 LPRGSGIVTRCPLVLKLKKLVNEDEWRGKVSYQDY----EIEILDASEVEKEINKAQNTIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPPDIGYKIKTLIRKYIQRQETINLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPD 250
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_HUMAN (Interferon-induced GTP-binding protein Mx1 OS=Homo sapiens GN=MX1 PE=1 SV=4) HSP 1 Score: 124.02 bits (310), Expect = 8.923e-28 Identity = 70/160 (43.75%), Postives = 101/160 (63.12%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQT------EGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + G Y ++ + +D + V KEI+ + I G+ IS+ I L I S +V +LTLIDLPG+T+VAV QP I I+ +++ Y+++ I L + P+N DIAT++A+ +A+EVDP G+RT G+LTK D Sbjct: 95 LPRGSGIVTRCPLVLKLKKLVNEDKWRGKVSYQDY----EIEISDASEVEKEINKAQNAIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPD 250
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_EUMJU (Interferon-induced GTP-binding protein Mx1 OS=Eumetopias jubatus GN=MX1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.923e-28 Identity = 70/160 (43.75%), Postives = 98/160 (61.25%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQT------EGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + G Y +F + +D + V EI+ + I G+ + IS+ I L + SP+V +LTLIDLPG+T+VAV QP I + +++ Y+ K I L + P N DIAT++A+ +A EVDP G+RT G+LTK D Sbjct: 93 LPRGSGIVTRCPLVLKLKKLLNKDEWRGKVSYQDF----EMEISDPSEVEVEINKAQNAIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGHQTKKLIKKYILKQETINLVVVPCNVDIATTEALSMAEEVDPDGDRTIGILTKPD 248
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX3_RAT (Interferon-induced GTP-binding protein Mx3 OS=Rattus norvegicus GN=Mx3 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.165e-27 Identity = 68/156 (43.59%), Postives = 100/156 (64.10%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAP--RKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + G ++ + + +D + V + I+ + I G IS+ I L + SP+V +LTLIDLPG+T+VAV QP I I+ ++ +Y++K I L + P+N DIAT++A+ +A+EVDP G+RT G+LTK D Sbjct: 93 LPRGSGIVTRCPLVLKLKKLNQGEEWKGKVTYDDIEVELSDPSEVEEAINTGQNHIAGVGLGISDKLISLDVSSPHVPDLTLIDLPGITRVAVGNQPSDIGRQIKRLITNYIQKQETINLVVVPSNVDIATTEALSMAQEVDPDGDRTIGILTKPD 248
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MSP1_SCHPO (Protein msp1, mitochondrial OS=Schizosaccharomyces pombe GN=msp1 PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.988e-27 Identity = 66/164 (40.24%), Postives = 103/164 (62.80%), Query Frame = 2 Query: 284 LESVVGRDFLPRGSGIVTRRPLVLQL-HQTEGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LE++VG +FLP+GS +VTRRP+ L L H + Y EF K TDF+ ++ ++D + S+ + + PI+L+IY+ ++ NL+LIDLPG ++ E QP + I + Y+ +P+ IILA+ A+ D+A S A++ +R VDP G RT GV+TK+D Sbjct: 280 LEAIVGHEFLPKGSNMVTRRPIELTLVHSADTAIPYGEFSGVQLGKITDFSKIQHILTD-LNMAVPSSQGVDDNPIRLTIYASHIPNLSLIDLPGYIQIHSEDQPADLDMKISKLCEKYIREPN-IILAVCAADVDLANSAALRASRRVDPLGLRTIGVVTKMD 441 The following BLAST results are available for this feature:
BLAST of CF835413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835413 ID=CF835413; Name=CF835413; organism=Citrus sinensis; type=EST; length=773bpback to top |