CF835413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX_SOLSE (Interferon-induced GTP-binding protein Mx OS=Solea senegalensis GN=mx PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.596e-27 Identity = 68/156 (43.59%), Postives = 97/156 (62.18%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAP--RKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PL L++ + G + + ++ D A V K+I + +I G IS I L I SP+V +LTLIDLPG+T+VAV GQP +I E I+ ++ ++ K I L + N D+AT++A+++A+E DP GERT G+LTK D Sbjct: 58 LPRGSGIVTRCPLELKMKRKNDGEGWQGKISYQDHEEEIQDPADVEKKIEEAQIQIAGVGVGISENMISLEIASPDVPDLTLIDLPGITRVAVHGQPVNIGEQIKKLIHKFITKQETICLVVHACNVDLATTEALQMAQEEDPEGERTLGILTKPD 213
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MXA_DANRE (Interferon-induced GTP-binding protein MxA OS=Danio rerio GN=mxa PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.428e-27 Identity = 69/156 (44.23%), Postives = 98/156 (62.82%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAP--RKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PL L++ +T+ + + + F D A V K+I D + G IS I L I S +V +LTLIDLPG+ +VAV+GQPE+I + I+ ++R +V + I L + P N DIAT++A+++A+ DP GERT G+LTK D Sbjct: 62 LPRGSGIVTRCPLELKMIRTKDQDRWHGRISYKTCEEDFDDPAEVEKKIRQAQDEMAGAGVGISEELISLQITSADVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIRKFVTRQETINLVVVPCNVDIATTEALQMAQAEDPDGERTLGILTKPD 217
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX2_RAT (Interferon-induced GTP-binding protein Mx2 OS=Rattus norvegicus GN=Mx2 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.428e-27 Identity = 67/156 (42.95%), Postives = 100/156 (64.10%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAP--RKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + G ++ + + +D + V + I+ + I G IS+ I L + SP+V +LTLIDLPG+T+VAV QP I I+ ++ +Y++K I L + P+N DIAT++A+ +A++VDP G+RT G+LTK D Sbjct: 93 LPRGSGIVTRCPLVLKLKKLNQGEEWKGKVTYDDIEVELSDPSEVEEAINTGQNHIAGVGLGISDKLISLDVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQIKRLITNYIQKQETINLVVVPSNVDIATTEALSMAQKVDPDGDRTIGILTKPD 248
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX2_BOVIN (Interferon-induced GTP-binding protein Mx2 OS=Bos taurus GN=MX2 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.554e-27 Identity = 70/158 (44.30%), Postives = 98/158 (62.03%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTE----GGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGI+TR PLVL+L + E G Y ++ + + V EI + I G IS+ I L I SP V +LTLIDLPG+T+VAVE QP+ I I+ +++ Y+++ I L + P N DIAT++A+ +A+EVDP G+RT G+LTK D Sbjct: 140 LPRGSGIITRCPLVLKLTKRECEWTGKITYRNIT----QQLQNPSEVEWEIRRAQNIIAGNGLGISHELINLEITSPEVPDLTLIDLPGITRVAVENQPQDIGLQIKALIKKYIQRQETINLVVVPCNVDIATTEALSMAQEVDPDGDRTIGILTKPD 293
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX2_HUMAN (Interferon-induced GTP-binding protein Mx2 OS=Homo sapiens GN=MX2 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.865e-27 Identity = 69/159 (43.40%), Postives = 95/159 (59.75%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTE-----GGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + G Y + D V KEI + + G + IS+ I L I SP V +LT+IDLPG+T+VAV+ QP I I+ +++ Y+++ I L + P N DIAT++A+ +A EVDP G+RT G+LTK D Sbjct: 143 LPRGSGIVTRCPLVLKLKKQPCEAWAGRISYRN----TELELQDPGQVEKEIHKAQNVMAGNGRGISHELISLEITSPEVPDLTIIDLPGITRVAVDNQPRDIGLQIKALIKKYIQRQQTINLVVVPCNVDIATTEALSMAHEVDPEGDRTIGILTKPD 297
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX1_HORSE (Interferon-induced GTP-binding protein Mx1 OS=Equus caballus GN=MX1 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.870e-26 Identity = 65/160 (40.62%), Postives = 99/160 (61.88%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQT------EGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRGSGIVTR PLVL+L + +G Y + + ++ V +++ + + G+ IS + L + SP+V +LTLIDLPG+T+VAV QP I I+ ++R Y+++ I L + P+N DIAT++A+ +A+EVDP G+RT G+LTK D Sbjct: 95 LPRGSGIVTRCPLVLKLKRLVKEDEWKGKVSYRDI----EVEISNALDVEEQVRKAQNVLAGEGVGISQELVTLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQIKTLIRKYIQRQETINLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPD 250
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX_ANAPL (Interferon-induced GTP-binding protein Mx OS=Anas platyrhynchos GN=MX PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.430e-25 Identity = 67/157 (42.68%), Postives = 94/157 (59.87%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRKKFTDF---AAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRG+GIVTR PL L+L + ++ + + R TD + V I + D + G IS I L I SP V +LTLIDLPG+ +VA+ QP+ I E I+ +++ + I L + P N DIAT++A+K+A+EVDP GERT G+LTK D Sbjct: 156 LPRGNGIVTRCPLELKLKKIPTSQEWKGKI-SYRNISTDLQHASEVENAIRNAQDVVAGTKGNISGELISLEICSPYVPDLTLIDLPGIARVAMRNQPQDIGEQIKKLIKKIISSKETINLVVVPCNVDIATTEALKMAQEVDPKGERTLGILTKPD 311
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MXE_DANRE (Interferon-induced GTP-binding protein MxE OS=Danio rerio GN=mxe PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.430e-25 Identity = 65/156 (41.67%), Postives = 97/156 (62.18%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRK--KFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRG+GIVTR PLVL+L + + L K + D A + K + + + G + IS+ I L I S +V +LTLIDLPG+ +VA QPE I + I++++ ++++ I L + PAN DIAT++A+K+A VDP+G+RT G+LTK D Sbjct: 68 LPRGTGIVTRCPLVLKLKKITKDKSWHGLLTYNDKIRELKDPAKIEKAVLNAQTALAGIGEGISHEMITLEIQSCDVPDLTLIDLPGIARVATGNQPEDIEKQIKSLIEKFIKRQETISLVVVPANIDIATTEALKMASTVDPTGQRTLGILTKPD 223
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MGM1_YEAST (Dynamin-like GTPase MGM1, mitochondrial OS=Saccharomyces cerevisiae GN=MGM1 PE=1 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 2.430e-25 Identity = 69/164 (42.07%), Postives = 98/164 (59.76%), Query Frame = 2 Query: 284 LESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGTDY-AEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LES+VGR+FLP+GS +VTRRP+ L L T + A+F DF V++ + E + S+ +S PIQL+I S V +L+L+DLPG +V QP + I ++ Y+ P+ IILAIS A+ D+A S A+K ++ DP G RT GV+TKLD Sbjct: 227 LESIVGREFLPKGSNMVTRRPIELTLVNTPNSNNVTADFPSMRLYNIKDFKEVKRMLM-ELNMAVPTSEAVSEEPIQLTIKSSRVPDLSLVDLPGYIQVEAADQPIELKTKIRDLCEKYLTAPN-IILAISAADVDLANSSALKASKAADPKGLRTIGVITKLD 388
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: MX_CTEID (Interferon-induced GTP-binding protein Mx OS=Ctenopharyngodon idella GN=mx PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.413e-25 Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 2 Query: 311 LPRGSGIVTRRPLVLQL---------HQTEGGTDYAEFLHAPRKKFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LPRG+GIVTR PLVL+L HQ G Y + KK D A + + + G + IS+ I L I S +V +LTLIDLPG+ +VA QP+ I + I++++ Y+++ I L + PAN DIAT++A+++A +VD +G+RT G+LTK D Sbjct: 68 LPRGTGIVTRCPLVLKLKKISKDNNWHQWHGLMSYRD----QTKKLKDPAEIENAVLKAQTVLAGTGEGISHEMITLEIQSSDVPDLTLIDLPGIARVATGNQPKDIEKQIKDLIEKYIKRQETISLVVVPANIDIATTEALQMASKVDSTGQRTLGILTKPD 226 The following BLAST results are available for this feature:
BLAST of CF835413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835413 ID=CF835413; Name=CF835413; organism=Citrus sinensis; type=EST; length=773bpback to top |