CF835815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.364e-35 Identity = 86/190 (45.26%), Postives = 113/190 (59.47%), Query Frame = 2 Query: 20 MKKNIVTFALVGILALAFPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 M+ V A+V +A+A T +V+SI++ FD + ++ +C K FYT DAF+ AA A+P FG+ GS + KR++AAF A +HET C+ +E + YC + Q+PC PGK YYGRGPIQL+ N NYG AG+AIG D LR P+ VA DP VSFKTALWFWMT P Sbjct: 1 MRSLAVVVAVVATVAMAIGTAH--GSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTP-SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAP 187
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.364e-35 Identity = 82/172 (47.67%), Postives = 104/172 (60.47%), Query Frame = 2 Query: 74 PTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 PT V+SIV+ FD + ++ +C K FYT DAF+ AA A+P FG+ GS + KRE+AAF A +HET C+ +E ++ YC + Q+PC PGK YYGRGPIQL+ N NYG AG+AIG D LR P+ VA DP VSFKTA+WFWMT P Sbjct: 72 PTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTP-SAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAP 242
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.641e-34 Identity = 76/165 (46.06%), Postives = 102/165 (61.82%), Query Frame = 2 Query: 95 NVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 ++ S ++ FD +K++ SC GK+FY+ +AF+NAA+++P FG SG KREIAAFFA +HET C++ E YC + Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA DPV+SFKTALWFWMT P Sbjct: 78 DLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSS-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSP 241
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.655e-34 Identity = 77/172 (44.77%), Postives = 103/172 (59.88%), Query Frame = 2 Query: 74 PTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 PT ++ SI++ FD +K++ +C GK FY+ +AF+NAA+++P FG SG KREIAAFFA +HET C++ E YC Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA DPV+SFK+ALWFWMT P Sbjct: 67 PTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSG-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSP 237
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 3.655e-34 Identity = 77/172 (44.77%), Postives = 103/172 (59.88%), Query Frame = 2 Query: 74 PTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 PT ++ SI++ FD +K++ +C GK FY+ +AF+NAA+++P FG SG KREIAAFFA +HET C++ E YC Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA DPV+SFK+ALWFWMT P Sbjct: 72 PTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSG-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSP 242
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 8.142e-34 Identity = 77/165 (46.67%), Postives = 97/165 (58.79%), Query Frame = 2 Query: 95 NVASIVTPQFF-DGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 ++ ++T F D +K++ SC GK FYT DAF+ AAKA+P FG+ G KREIAAF A +HET CY+ E YC + Q+PC G+ YYGRGPIQ++ N NYG AGKAIG D + P+ VA D V+SFKTA WFWMT P Sbjct: 64 DIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYC-VPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSP 227
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.063e-33 Identity = 85/190 (44.74%), Postives = 111/190 (58.42%), Query Frame = 2 Query: 20 MKKNIVTFALVGILALAFPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 M+ V A+V +A+A T +V+SIV+ FD + ++ +C K FYT DAF+ AA A+P FG+ GS + KRE+AAF A +HET C+ +E S+ YC + Q+PC PGK YYGRGPIQL+ N NYG AG+AIG D L P+ VA D V FKTA+WFWMT P Sbjct: 1 MRSLAVVVAVVATVAMAIGTAR--GSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTP-SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPP 187
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 142.51 bits (358), Expect = 1.389e-33 Identity = 80/172 (46.51%), Postives = 102/172 (59.30%), Query Frame = 2 Query: 74 PTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 PT V+SIV+ FD + ++ +C K FYT DAF+ AA A+ FG+ G + KRE+AAF A +HET C+ +E ++ YC + Q+PC PGK YYGRGPIQL+ N NYG AG+AIG D LR P+ VA DP VSFKTA+WFWMT P Sbjct: 69 PTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTP-SAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAP 239
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 3.094e-33 Identity = 80/165 (48.48%), Postives = 98/165 (59.39%), Query Frame = 2 Query: 98 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEIN-KSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 VASI++P FD + ++ +CA K FYT DAF+ AA AYP F + G + KRE+AAF A +HET C+ EE N + YC E ++PC GK YYGRGPIQ+T N NYG AG+AIG D L P+ VA D VSFKTA WFWMT P Sbjct: 76 VASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYC-EPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSP 239
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 3.094e-33 Identity = 76/164 (46.34%), Postives = 101/164 (61.59%), Query Frame = 2 Query: 98 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 ++S+++ F+ +K++ +C GK FYT DAFL+AAKA+P F + G KREIAAF +HET C++ E N S YC + + ++PC GK YYGRGPIQ++ N NYG G+AIG D L P+ VA DPV+SFKTALWFWMT P Sbjct: 68 LSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPST-YC-QASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSP 229 The following BLAST results are available for this feature:
BLAST of CF835815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835815 ID=CF835815; Name=CF835815; organism=Citrus sinensis; type=EST; length=574bpback to top |