CF835815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 1.205e-61 Identity = 112/162 (69.14%), Postives = 132/162 (81.48%), Query Frame = 2 Query: 95 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSG-SPEVSKREIAAFFAHVTHETGHLCYIEEINKSNR-YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATI 574 +V S+VT FF+GIKNQA CAGKSFYTR +FLNAA++Y F + + + SKREIAAFFAHVTHETGH+CYI EIN +N YCD+ NKQ+PC PGK YYGRGP+Q++ N NYG AGK IGFDGLR P+ VA+DP +SFKTALWFWM NVH VM+QGFGATI Sbjct: 83 SVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATI 244
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 4.581e-61 Identity = 109/161 (67.70%), Postives = 126/161 (78.26%), Query Frame = 2 Query: 95 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVS-KREIAAFFAHVTHETGHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATI 574 NVA++VT FF+GIKNQA + C GK+FYTR AFL+A AYP F G EV KREIAAFFAHVTHETGH CYI EINKSN YCD N+Q+PC G+ YYGRGP+Q++ N NYG AG+ IGF+GL P VA+D V++FKTALWFWM NVH VM QGFGATI Sbjct: 79 NVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHGVMPQGFGATI 239
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 3.283e-59 Identity = 109/162 (67.28%), Postives = 129/162 (79.63%), Query Frame = 2 Query: 95 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSG-SPEVSKREIAAFFAHVTHETGHLCYIEEINKSNR-YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATI 574 +V S+VT FF+GIKNQA CAGK+FYTR +FLNAA +Y F + + SKREIAAFFAHVTHETGH+CYI EIN ++ YCD+ NKQ+PC PGK YYGRGP+Q++ N NYG AG+ IGFDGLR P+ VA+DP +SFKTALWFWM NVH VM QGFGATI Sbjct: 86 SVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATI 247
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 4.287e-59 Identity = 106/160 (66.25%), Postives = 123/160 (76.88%), Query Frame = 2 Query: 95 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVS-KREIAAFFAHVTHETGHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGAT 571 NVAS+VT FF+GIKNQA + C GK+FYTR AFL+A K YP F G +V KREIAAFFAH THETGH CYI EINKSN YCD +Q+PC G+ YYGRGP+Q++ N NYG AG+AIGFDGL P VA+D VV+FK ALWFWM +VH V+ QGFGAT Sbjct: 68 NVASVVTSSFFNGIKNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQGFGAT 227
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 3.756e-55 Identity = 99/161 (61.49%), Postives = 123/161 (76.40%), Query Frame = 2 Query: 95 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVSKREIAAFFAHVTHETGHLCYIEEINKSNR-YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATI 574 +V SIVT FF+GI NQA CAGK+FYTRD+F+NAA +P F + V++REIA FAH THETGH CYIEEIN ++R YCDE N+QYPC PGK Y+GRGPIQL+ N NYGA G+++ + L PE V+ +P V+F+T LWFWM +V PV+NQGFGATI Sbjct: 71 SVGSIVTQAFFNGIINQAGGGCAGKNFYTRDSFINAANTFPNFANS---VTRREIATMFAHFTHETGHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRPVLNQGFGATI 228
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 5.997e-53 Identity = 104/161 (64.60%), Postives = 124/161 (77.02%), Query Frame = 2 Query: 101 ASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHLCYIEEINKSNR-YCDEQN-KQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATI 574 A I+T F +GI +QA + CAGK+FYTRDAFL+A +Y FG GS + SKREIAA FAH THETGH CYIEEI+ +++ YCDE++ QYPC K Y+GRGPIQL+ N NYG AG A FDGL APETV+ D VVSFKTALW+WM +V PV+NQGFGATI Sbjct: 69 ADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATI 229
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.131e-51 Identity = 101/164 (61.59%), Postives = 121/164 (73.78%), Query Frame = 2 Query: 95 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHETGHLCYIEEIN-KSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP--VMNQGFGATI 574 +VASIVTP+FF + QA CA K FYTRDAFL AA YP FG +GS + SKREIAAFFAH HET CYIEEI+ S YCDE + Q+PC+ GK YYGRGP+Q++ N NYG AG++IGFDGL P+ VA+ PV++F+TALW+W NVH V QGFGATI Sbjct: 67 SVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATI 230
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.638e-50 Identity = 102/163 (62.58%), Postives = 122/163 (74.85%), Query Frame = 2 Query: 95 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHLCYIEEINKS--NRYCDEQNK-QYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGAT 571 +V+ IV+ FFDGI QAAASC GK+FYTR AFL+A P+FG+ GS + +KREIAAFFAH++HET +LC+IEE + + YCD+ QYPC GK YYGRGP+QL+ N NY AG+AIGFDGL PE VA D SFK A+WFWMTNVH VMNQGFGAT Sbjct: 86 SVSDIVSQAFFDGIIGQAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNVHSVMNQGFGAT 246
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 8.961e-49 Identity = 100/165 (60.61%), Postives = 123/165 (74.55%), Query Frame = 2 Query: 98 VASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSG-SPEVSKREIAAFFAHVTHETGHLCYIEEIN-KSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWM-TNVHPVM---NQGFGATI 574 V+ IVT +F+DGI +QAAA+C GKSFYTR FL A AYP FG+ + E KREIAA+FAHVTHETGHLCYIEE + +N YC E ++QYPC P K Y+GRGP+QL+ N NY AGK + FDGL P+ V +DP++SFKT+LWFW+ V V+ NQGFGATI Sbjct: 46 VSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQE-SQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATI 209
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.100e-36 Identity = 76/160 (47.50%), Postives = 104/160 (65.00%), Query Frame = 2 Query: 98 VASIVTPQFFDGI-KNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT 532 V+SIV+ Q + + ++ A+C + FYT +F+ AA +P+F + G + KRE+AAF A ++HET LCY EEIN + YCD +KQ+PC PGK Y+GRGPIQ++ N NYG AG+A+GFDGLR PE VA ++F+TALWFWMT Sbjct: 49 VSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMT 208 The following BLAST results are available for this feature:
BLAST of CF835815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835815 ID=CF835815; Name=CF835815; organism=Citrus sinensis; type=EST; length=574bpback to top |